RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SARAFQ96BY9 339 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 PLD4Q96BZ4 506 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 SLAMF6Q96DU3 332 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 TSSK2Q96PF2 358 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 MRPL27Q9P0M9 148 aaKnown RBP8.07□□□□□ -1.12
PDGFC-201ENST00000274071 HIF3AQ9Y2N7 669 aa8.07□□□□□ -1.12
PDGFC-201ENST00000274071 NPIPA5A0A0B4J1W7 369 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 METTL12A8MUP2 240 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 GPR89AB7ZAQ6 455 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 G3V3Y1 287 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 CDS2O95674 445 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 GPR89BP0CG08 455 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 MPLP40238 635 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 RPS27P42677 84 aaKnown RBP8.06□□□□□ -1.12
PDGFC-201ENST00000274071 CSNK1A1P48729 337 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 TPPP2P59282 170 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 C17orf67Q0P5P2 114 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 WDR38Q5JTN6 314 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 C1orf174Q8IYL3 243 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 OR52R1Q8NGF1 315 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 OR2T10Q8NGZ9 312 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 OR1E3Q8WZA6 343 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 ADIPOR1Q96A54 375 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 SLC35A4Q96G79 324 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 ZNF48Q96MX3 618 aaPredicted RBP8.06□□□□□ -1.12
PDGFC-201ENST00000274071 SLC35D1Q9NTN3 355 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 MRPS16Q9Y3D3 137 aaKnown RBP8.06□□□□□ -1.12
PDGFC-201ENST00000274071 NSG1A0A0A6YYJ2 146 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 H7BYZ3 331 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 HRASP01112 189 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 NGFRP08138 427 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 PPIAL4GP0DN37 164 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 TLE3Q04726 772 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 SHBQ15464 509 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 VAX1Q5SQQ9 334 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 PTCRAQ6ISU1 281 aaPredicted RBP8.06□□□□□ -1.12
PDGFC-201ENST00000274071 FAM180AQ6UWF9 173 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 NRSN1Q8IZ57 195 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 SLC39A11Q8N1S5 342 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 Q8N976 141 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 OR4D6Q8NGJ1 314 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 WBP2Q969T9 261 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 ZNF689Q96CS4 500 aaPredicted RBP8.06□□□□□ -1.12
PDGFC-201ENST00000274071 C4orf45Q96LM5 186 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 SLC46A1Q96NT5 459 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 SCGB3A2Q96PL1 93 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 SLC46A2Q9BY10 475 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 MTHFD2LQ9H903 347 aaPredicted RBP8.06□□□□□ -1.12
PDGFC-201ENST00000274071 TAS2R4Q9NYW5 299 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 PRSS50Q9UI38 385 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 TP53TG3Q9ULZ0 132 aa8.06□□□□□ -1.12
PDGFC-201ENST00000274071 A0A1B0GV72 72 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 ZFP92A6NM28 416 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 C8orf89P0DMQ9 161 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 PTGER4P35408 488 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 RBMXP38159 391 aaKnown RBP8.05□□□□□ -1.12
PDGFC-201ENST00000274071 DEFB103AP81534 67 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 RTP5Q14D33 572 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 TCF24Q7RTU0 167 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 FBXL14Q8N1E6 418 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 ST6GALNAC3Q8NDV1 305 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 FAM46BQ96A09 425 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 RASD2Q96D21 266 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 KLF16Q9BXK1 252 aaPredicted RBP8.05□□□□□ -1.12
PDGFC-201ENST00000274071 RNF114Q9Y508 228 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 ANAPC1Q9H1A4 1944 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 IGHV1-69-2A0A0G2JMI3 117 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 A0A1W2PNV4 684 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 ZNF891A8MT65 544 aaPredicted RBP8.05□□□□□ -1.12
PDGFC-201ENST00000274071 G3V4G9 280 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 TIAF1O95411 115 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 CTSSP25774 331 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 LINC00310P59036 64 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 RPL15P61313 204 aaKnown RBP8.05□□□□□ -1.12
PDGFC-201ENST00000274071 PAX2Q02962 417 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 C1QL3Q5VWW1 255 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 LHFPL1Q86WI0 220 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 SLC16A11Q8NCK7 471 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 NUP43Q8NFH3 380 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 OR5AU1Q8NGC0 362 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 OR13G1Q8NGZ3 307 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 UBE2E3Q969T4 207 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 STARD4Q96DR4 205 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 BTF3L4Q96K17 158 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 CRISPLD2Q9H0B8 497 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 PATZ1Q9HBE1 687 aaKnown RBP8.05□□□□□ -1.12
PDGFC-201ENST00000274071 CISD1Q9NZ45 108 aaKnown RBP8.05□□□□□ -1.12
PDGFC-201ENST00000274071 COLQQ9Y215 455 aaPredicted RBP8.05□□□□□ -1.12
PDGFC-201ENST00000274071 SLC22A13Q9Y226 551 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 TRAPPC1Q9Y5R8 145 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 EML5Q05BV3 1969 aa8.05□□□□□ -1.12
PDGFC-201ENST00000274071 NUP210Q8TEM1 1887 aaPredicted RBP8.05□□□□□ -1.12
PDGFC-201ENST00000274071 COL4A6Q14031 1691 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 IGLC7A0M8Q6 106 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 GRIFINA4D1Z8 144 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 BLACEA4D250 179 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 SPINT1O43278 529 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 NDUFB2O95178 105 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 C8AP07357 584 aa8.04□□□□□ -1.12
PDGFC-201ENST00000274071 GLB1P16278 677 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms