RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 OR8H2Q8N162 312 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 PRSS35Q8N3Z0 413 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 ASCC1Q8N9N2 400 aaKnown RBP7.15□□□□□ -1.26
TPM3-201ENST00000271850 OR4S1Q8NGB4 309 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 RPS4Y2Q8TD47 263 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 ITFG2Q969R8 447 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 SLC7A6OSQ96CW6 309 aaPredicted RBP7.15□□□□□ -1.26
TPM3-201ENST00000271850 THTPAQ9BU02 230 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 CHST6Q9GZX3 395 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 MOB1AQ9H8S9 216 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 PAPOLBQ9NRJ5 636 aaKnown RBP7.15□□□□□ -1.26
TPM3-201ENST00000271850 RBFOX1Q9NWB1 397 aaKnown RBP7.15□□□□□ -1.26
TPM3-201ENST00000271850 CLN6Q9NWW5 311 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 GTF2A1LQ9UNN4 478 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 POLDIP2Q9Y2S7 368 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 HILPDAQ9Y5L2 63 aa7.15□□□□□ -1.26
TPM3-201ENST00000271850 IGKV1-12A0A0C4DH73 117 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 FAM230AA0A1W2PPH8 454 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 WI2-2373I1.2A0A1W2PRP0 233 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 A0A1W2PRX2 142 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 DHRS7CA6NNS2 312 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 ZAR1LA6NP61 321 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 GNGT2O14610 69 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 XPNPEP2O43895 674 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 E2F6O75461 281 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 RPP14O95059 124 aaKnown RBP7.14□□□□□ -1.27
TPM3-201ENST00000271850 IGKV1D-12P01611 117 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 DUSP1P28562 367 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 KIR3DL2P43630 455 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 OR3A1P47881 315 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 EDDM3BP56851 147 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 ISL1P61371 349 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 ESRRGP62508 458 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 ZNF91Q05481 1191 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 EDDM3AQ14507 147 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 BCL2L15Q5TBC7 163 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 LCN1P1Q5VSP4 162 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 NXNL2Q5VZ03 156 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 ETV3LQ6ZN32 361 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 RDH10Q8IZV5 341 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 TCEANCQ8N8B7 351 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 OR13D1Q8NGV5 346 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 TMEM163Q8TC26 289 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 FOXRED1Q96CU9 486 aaPredicted RBP7.14□□□□□ -1.27
TPM3-201ENST00000271850 CEP19Q96LK0 163 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 LRGUKQ96M69 825 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 ZNF714Q96N38 554 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 TBX5Q99593 518 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 PRSS22Q9GZN4 317 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 CHST5Q9GZS9 411 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 SNX5Q9Y5X3 404 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 TMEM14AQ9Y6G1 99 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 SESN1Q9Y6P5 492 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 HUWE1Q7Z6Z7 4374 aaKnown RBP7.14□□□□□ -1.27
TPM3-201ENST00000271850 DNAH7Q8WXX0 4024 aa7.14□□□□□ -1.27
TPM3-201ENST00000271850 A0A1W2PPH5 198 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 A0A1W2PQL4 384 aaPredicted RBP7.13□□□□□ -1.27
TPM3-201ENST00000271850 FAM172BPA6NC97 362 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 ENTPD6O75354 484 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 MPIG6BO95866 241 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 HAND1O96004 215 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 CHRM2P08172 466 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 BCL3P20749 454 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 POLR2IP36954 125 aaKnown RBP7.13□□□□□ -1.27
TPM3-201ENST00000271850 VDAC2P45880 294 aaPredicted RBP7.13□□□□□ -1.27
TPM3-201ENST00000271850 ZNF85Q03923 595 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 EMX1Q04741 257 aaPredicted RBP7.13□□□□□ -1.27
TPM3-201ENST00000271850 DYNC1I2Q13409 638 aaKnown RBP7.13□□□□□ -1.27
TPM3-201ENST00000271850 MINOS1Q5TGZ0 78 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 PRAMEF5Q5TYX0 476 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 SLC25A26Q70HW3 274 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 ZNF676Q8N7Q3 588 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 OR4F17Q8NGA8 305 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 OR5AU1Q8NGC0 362 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 SGCDQ92629 289 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 ADAT3Q96EY9 351 aaPredicted RBP7.13□□□□□ -1.27
TPM3-201ENST00000271850 SNX22Q96L94 193 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 OR4F4Q96R69 305 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 IL4I1Q96RQ9 567 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 TMEM133Q9H2Q1 129 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 ZNF556Q9HAH1 456 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 SEBOXQ9HB31 216 aaPredicted RBP7.13□□□□□ -1.27
TPM3-201ENST00000271850 INPP5EQ9NRR6 644 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 HHLA2Q9UM44 414 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 POMPQ9Y244 141 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 LINC00312Q9Y6C7 94 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 MINOS1-NBL1R4GNA1 71 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 KIAA2026Q5HYC2 2103 aa7.13□□□□□ -1.27
TPM3-201ENST00000271850 LOC107986453A0A1B0GWG9 222 aa7.12□□□□□ -1.27
TPM3-201ENST00000271850 LY6LH3BQJ8 138 aa7.12□□□□□ -1.27
TPM3-201ENST00000271850 F2RL2O00254 374 aa7.12□□□□□ -1.27
TPM3-201ENST00000271850 FAM107AO95990 144 aa7.12□□□□□ -1.27
TPM3-201ENST00000271850 IGLV1-47P01700 117 aa7.12□□□□□ -1.27
TPM3-201ENST00000271850 MEF2CQ06413 473 aaPredicted RBP7.12□□□□□ -1.27
TPM3-201ENST00000271850 SLC34A1Q06495 639 aa7.12□□□□□ -1.27
TPM3-201ENST00000271850 FLOT2Q14254 428 aa7.12□□□□□ -1.27
TPM3-201ENST00000271850 ZNF146Q15072 292 aa7.12□□□□□ -1.27
TPM3-201ENST00000271850 GRK1Q15835 563 aa7.12□□□□□ -1.27
TPM3-201ENST00000271850 KDM4DQ6B0I6 523 aa7.12□□□□□ -1.27
TPM3-201ENST00000271850 C18orf65Q6ZTR6 163 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms