RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 C5orf24Q7Z6I8 188 aa23.87■■□□□ 1.41
CBX4-201ENST00000269397 LURAP1LQ8IV03 231 aa23.87■■□□□ 1.41
CBX4-201ENST00000269397 SUMF2Q8NBJ7 301 aa23.87■■□□□ 1.41
CBX4-201ENST00000269397 SPACA9Q96E40 222 aaPredicted RBP23.87■■□□□ 1.41
CBX4-201ENST00000269397 TP53RKQ96S44 253 aa23.87■■□□□ 1.41
CBX4-201ENST00000269397 CELA2AP08217 269 aa23.87■■□□□ 1.41
CBX4-201ENST00000269397 CD63P08962 238 aa23.87■■□□□ 1.41
CBX4-201ENST00000269397 RPS10P46783 165 aaKnown RBP23.87■■□□□ 1.41
CBX4-201ENST00000269397 SUCLG1P53597 346 aaKnown RBP23.87■■□□□ 1.41
CBX4-201ENST00000269397 CARFQ8N187 725 aa23.87■■□□□ 1.41
CBX4-201ENST00000269397 SLC39A7Q92504 469 aa23.87■■□□□ 1.41
CBX4-201ENST00000269397 TINAGQ9UJW2 476 aa23.87■■□□□ 1.41
CBX4-201ENST00000269397 CCDC163A0A0D9SF12 145 aa23.86■■□□□ 1.41
CBX4-201ENST00000269397 DHHO43323 396 aa23.86■■□□□ 1.41
CBX4-201ENST00000269397 SCRG1O75711 98 aa23.86■■□□□ 1.41
CBX4-201ENST00000269397 PATE4P0C8F1 98 aa23.86■■□□□ 1.41
CBX4-201ENST00000269397 CHATP28329 748 aa23.86■■□□□ 1.41
CBX4-201ENST00000269397 EWSR1Q01844 656 aaKnown RBP eCLIP23.86■■□□□ 1.412e-6■■■■■ 28.6
CBX4-201ENST00000269397 GPHA2Q96T91 129 aa23.86■■□□□ 1.41
CBX4-201ENST00000269397 SUCNR1Q9BXA5 334 aa23.86■■□□□ 1.41
CBX4-201ENST00000269397 SEMA5BQ9P283 1151 aa23.86■■□□□ 1.41
CBX4-201ENST00000269397 MTCH2Q9Y6C9 303 aa23.86■■□□□ 1.41
CBX4-201ENST00000269397 OTX1P32242 354 aaPredicted RBP23.86■■□□□ 1.41
CBX4-201ENST00000269397 FBXL14Q8N1E6 418 aa23.86■■□□□ 1.41
CBX4-201ENST00000269397 KDF1Q8NAX2 398 aaPredicted RBP23.86■■□□□ 1.41
CBX4-201ENST00000269397 DEFB126Q9BYW3 111 aa23.86■■□□□ 1.41
CBX4-201ENST00000269397 STRAPQ9Y3F4 350 aaKnown RBP23.86■■□□□ 1.41
CBX4-201ENST00000269397 IGKV1-12A0A0C4DH73 117 aa23.85■■□□□ 1.41
CBX4-201ENST00000269397 NPIPA2E9PIF3 369 aa23.85■■□□□ 1.41
CBX4-201ENST00000269397 NPIPA3F8WFD2 350 aa23.85■■□□□ 1.41
CBX4-201ENST00000269397 K7N7A8 449 aa23.85■■□□□ 1.41
CBX4-201ENST00000269397 PPIHO43447 177 aaKnown RBP23.85■■□□□ 1.41
CBX4-201ENST00000269397 IGKV1D-12P01611 117 aa23.85■■□□□ 1.41
CBX4-201ENST00000269397 LMO1P25800 156 aa23.85■■□□□ 1.41
CBX4-201ENST00000269397 S100PP25815 95 aa23.85■■□□□ 1.41
CBX4-201ENST00000269397 SHBQ15464 509 aa23.85■■□□□ 1.41
CBX4-201ENST00000269397 LGI3Q8N145 548 aa23.85■■□□□ 1.41
CBX4-201ENST00000269397 EIF3IQ13347 325 aaKnown RBP23.85■■□□□ 1.41
CBX4-201ENST00000269397 OR2G3Q8NGZ4 309 aa23.85■■□□□ 1.41
CBX4-201ENST00000269397 MAGT1Q9H0U3 335 aa23.85■■□□□ 1.41
CBX4-201ENST00000269397 FRYLO94915 3013 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 FREM2Q5SZK8 3169 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 ATXN7O15265 892 aaPredicted RBP23.84■■□□□ 1.41
CBX4-201ENST00000269397 IGHV2-70P01814 119 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 FBP1P09467 338 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 IL13RA2Q14627 380 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 Q6ZPA2 131 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 SPTSSAQ969W0 71 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 NKX2-6A6NCS4 301 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 GNMTQ14749 295 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 HAGHQ16775 308 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 ZNF343Q6P1L6 599 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 BOD1Q96IK1 185 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 ULBP2Q9BZM5 246 aa23.84■■□□□ 1.41
CBX4-201ENST00000269397 NXPH3O95157 252 aa23.83■■□□□ 1.41
CBX4-201ENST00000269397 AADACP22760 399 aa23.83■■□□□ 1.41
CBX4-201ENST00000269397 RAB5CP51148 216 aa23.83■■□□□ 1.41
CBX4-201ENST00000269397 H3F3AP84243 136 aa23.83■■□□□ 1.41
CBX4-201ENST00000269397 C10orf128Q5T292 105 aa23.83■■□□□ 1.41
CBX4-201ENST00000269397 RAET1LQ5VY80 246 aa23.83■■□□□ 1.41
CBX4-201ENST00000269397 ZNF774Q6NX45 483 aa23.83■■□□□ 1.41
CBX4-201ENST00000269397 MR1Q95460 341 aa23.83■■□□□ 1.41
CBX4-201ENST00000269397 CHCHD2Q9Y6H1 151 aaPredicted RBP23.83■■□□□ 1.41
CBX4-201ENST00000269397 URGCP-MRPS24S4R325 110 aa23.83■■□□□ 1.41
CBX4-201ENST00000269397 DTYMKP23919 212 aa23.83■■□□□ 1.4
CBX4-201ENST00000269397 ATP6V0CP27449 155 aa23.83■■□□□ 1.4
CBX4-201ENST00000269397 KIAA0141Q14154 515 aaPredicted RBP23.83■■□□□ 1.4
CBX4-201ENST00000269397 RABEPKQ7Z6M1 372 aa23.83■■□□□ 1.4
CBX4-201ENST00000269397 LRTM2Q8N967 370 aa23.83■■□□□ 1.4
CBX4-201ENST00000269397 TMEM54Q969K7 222 aa23.83■■□□□ 1.4
CBX4-201ENST00000269397 BORCS8Q96FH0 119 aa23.83■■□□□ 1.4
CBX4-201ENST00000269397 HSF4Q9ULV5 492 aa23.83■■□□□ 1.4
CBX4-201ENST00000269397 ADAMTS20P59510 1910 aa23.83■■□□□ 1.4
CBX4-201ENST00000269397 WDR74Q6RFH5 385 aaPredicted RBP23.82■■□□□ 1.4
CBX4-201ENST00000269397 HEPN1Q6WQI6 88 aa23.82■■□□□ 1.4
CBX4-201ENST00000269397 FADS6Q8N9I5 356 aa23.82■■□□□ 1.4
CBX4-201ENST00000269397 CA14Q9ULX7 337 aa23.82■■□□□ 1.4
CBX4-201ENST00000269397 ST3GAL6Q9Y274 331 aa23.82■■□□□ 1.4
CBX4-201ENST00000269397 LOC102725191A0A1B0GVB3 256 aa23.82■■□□□ 1.4
CBX4-201ENST00000269397 IGSF23A1L1A6 192 aa23.82■■□□□ 1.4
CBX4-201ENST00000269397 IFNA17P01571 189 aa23.82■■□□□ 1.4
CBX4-201ENST00000269397 LCATP04180 440 aa23.82■■□□□ 1.4
CBX4-201ENST00000269397 KMT5CQ86Y97 462 aa23.82■■□□□ 1.4
CBX4-201ENST00000269397 OR2C3Q8N628 320 aa23.82■■□□□ 1.4
CBX4-201ENST00000269397 MALSU1Q96EH3 234 aa23.82■■□□□ 1.4
CBX4-201ENST00000269397 ZNF700Q9H0M5 742 aa23.82■■□□□ 1.4
CBX4-201ENST00000269397 TMEM123Q8N131 208 aa23.81■■□□□ 1.4
CBX4-201ENST00000269397 OR4D5Q8NGN0 318 aa23.81■■□□□ 1.4
CBX4-201ENST00000269397 SYT3Q9BQG1 590 aa23.81■■□□□ 1.4
CBX4-201ENST00000269397 GGACTQ9BVM4 153 aa23.81■■□□□ 1.4
CBX4-201ENST00000269397 RBP2P50120 134 aa23.81■■□□□ 1.4
CBX4-201ENST00000269397 STARD6P59095 220 aa23.81■■□□□ 1.4
CBX4-201ENST00000269397 HIST1H3AP68431 136 aa23.81■■□□□ 1.4
CBX4-201ENST00000269397 HIST2H3PS2Q5TEC6 136 aa23.81■■□□□ 1.4
CBX4-201ENST00000269397 HIST2H3AQ71DI3 136 aa23.81■■□□□ 1.4
CBX4-201ENST00000269397 TMEM171Q8WVE6 324 aa23.81■■□□□ 1.4
CBX4-201ENST00000269397 RBFOX3A6NFN3 312 aa23.8■■□□□ 1.4
CBX4-201ENST00000269397 ZNF724A8MTY0 619 aa23.8■■□□□ 1.4
CBX4-201ENST00000269397 H0YL77 283 aa23.8■■□□□ 1.4
CBX4-201ENST00000269397 SPSB1Q96BD6 273 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms