RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 PLEKHF2Q9H8W4 249 aa6.95□□□□□ -1.3
USP3-201ENST00000268049 PPIAL4EA0A075B759 164 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 TEX50A0A1B0GTY4 177 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 PPIAL4DF5H284 164 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 PHF1O43189 567 aaPredicted RBP6.94□□□□□ -1.3
USP3-201ENST00000268049 OR2T7P0C7T2 308 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 PPIAL4FP0DN26 164 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 PTGER1P34995 402 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 TMEM268Q5VZI3 342 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 LEMD1Q68G75 181 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 WDR31Q8NA23 367 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 ST6GALNAC3Q8NDV1 305 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 ZNF738Q8NE65 137 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 OR2AE1Q8NHA4 323 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 GPX8Q8TED1 209 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 PPP1R1CQ8WVI7 109 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 TMEM106AQ96A25 262 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 DPH3Q96FX2 82 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 DPH3P1Q9H4G8 78 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 OR6C3Q9NZP0 311 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 PPIAL4AQ9Y536 164 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 KCNE1BA0A087WTH5 132 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 IGHV3-15A0A0B4J1V0 119 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 PLPP1O14494 284 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 OR4E1P0C645 316 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 LINC00271P0C7V0 271 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 HTR1FP30939 366 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 OR10J1P30954 320 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 TGIF1Q15583 401 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 FFAR4Q5NUL3 377 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 MAMSTRQ6ZN01 415 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 FAM214BQ7L5A3 538 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 NOXO1Q8NFA2 376 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 FAM3DQ96BQ1 224 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 CXorf58Q96LI9 332 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 MRPS18BQ9Y676 258 aaKnown RBP6.94□□□□□ -1.3
USP3-201ENST00000268049 TMEM30CPA0ZSE6 113 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 CHEK1O14757 476 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 RAB29O14966 203 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 B3GALT4O96024 378 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 SRMP19623 302 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 UBE2G2P60604 165 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 PRTGQ2VWP7 1150 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 DEFB121Q5J5C9 76 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 LYRM7Q5U5X0 104 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 WDR73Q6P4I2 378 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 SUMF1Q8NBK3 374 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 PELI1Q96FA3 418 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 TMEM56Q96MV1 263 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 NIPSNAP1Q9BPW8 284 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 TPPP3Q9BW30 176 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 SELENOIQ9C0D9 397 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 GLIPR2Q9H4G4 154 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 MRPS28Q9Y2Q9 187 aaKnown RBP6.94□□□□□ -1.3
USP3-201ENST00000268049 RAB27BO00194 218 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 OPN1MWP04001 364 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 OPN1MW2P0DN77 364 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 OPN1MW3P0DN78 364 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 CALCBP10092 127 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 DDTP30046 118 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 DIO1P49895 249 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 GNG3P63215 75 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 SMAGPQ0VAQ4 97 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 FZD5Q13467 585 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 ZNF547Q8IVP9 402 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 ZNF485Q8NCK3 441 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 OR10J5Q8NHC4 309 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 LRRC29Q8WV35 223 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 TAAR6Q96RI8 345 aa6.94□□□□□ -1.3
USP3-201ENST00000268049 GSX1Q9H4S2 264 aaPredicted RBP6.94□□□□□ -1.3
USP3-201ENST00000268049 TRAV27A0A087WT01 109 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 LOC101059948A0A1B0GTJ6 334 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 TCRBV16S1A1N1A0A5B0 115 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 SIRPB1O00241 398 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 OR8U8P0C7N1 319 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 DTYMKP23919 212 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 DUSP1P28562 367 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 SLC6A12P48065 614 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 SNRPNP63162 240 aaKnown RBP6.93□□□□□ -1.3
USP3-201ENST00000268049 Q1RN00 199 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 C11orf87Q6NUJ2 197 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 PAQR6Q6TCH4 344 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 ADGRE4PQ86SQ3 457 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 LHX4Q969G2 390 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 EGLN2Q96KS0 407 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 RHOVQ96L33 236 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 REPIN1Q9BWE0 567 aaKnown RBP6.93□□□□□ -1.3
USP3-201ENST00000268049 TMEM74BQ9NUR3 256 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 FKBP11Q9NYL4 201 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 MTCH1Q9NZJ7 389 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 E5RGE8 158 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 ADRA2CP18825 462 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 CD96P40200 585 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 KIR2DS2P43631 304 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 GNG10P50151 68 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 MIDNQ504T8 468 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 RNFT1Q5M7Z0 435 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 PRAMEF5Q5TYX0 476 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 PRAMEF6Q5VXH4 476 aa6.93□□□□□ -1.3
USP3-201ENST00000268049 NKAIN3Q8N8D7 197 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms