RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 ZNF407Q9C0G0 2248 aa14.66□□□□□ -0.06
RTN1-201ENST00000267484 TRBV23-1A0A0A0MS06 115 aa14.66□□□□□ -0.06
RTN1-201ENST00000267484 NSG1A0A0A6YYJ2 146 aa14.66□□□□□ -0.06
RTN1-201ENST00000267484 DKK1O94907 266 aa14.66□□□□□ -0.06
RTN1-201ENST00000267484 SEC11BP0C7V7 166 aa14.66□□□□□ -0.06
RTN1-201ENST00000267484 SPINK2P20155 84 aa14.66□□□□□ -0.06
RTN1-201ENST00000267484 LIAT1Q6ZQX7 453 aa14.66□□□□□ -0.06
RTN1-201ENST00000267484 ZIC4Q8N9L1 334 aa14.66□□□□□ -0.06
RTN1-201ENST00000267484 SPTSSAQ969W0 71 aa14.66□□□□□ -0.06
RTN1-201ENST00000267484 KCNJ16Q9NPI9 418 aa14.66□□□□□ -0.06
RTN1-201ENST00000267484 B4GALT1P15291 398 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 GLP1RP43220 463 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 IGSF11Q5DX21 431 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 C10orf128Q5T292 105 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 ZNF468Q5VIY5 522 aaPredicted RBP14.65□□□□□ -0.06
RTN1-201ENST00000267484 ZFP62Q8NB50 900 aaPredicted RBP14.65□□□□□ -0.06
RTN1-201ENST00000267484 BORCS8Q96FH0 119 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 GINS3Q9BRX5 216 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 SRXN1Q9BYN0 137 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 OCIAD1Q9NX40 245 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 ST3GAL6Q9Y274 331 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 A0A0J9YW62 118 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 OR8U8P0C7N1 319 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 AADACP22760 399 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 EIF1P41567 113 aaKnown RBP14.65□□□□□ -0.06
RTN1-201ENST00000267484 ZNF565Q8N9K5 539 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 C18orf12Q96KH6 178 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 PI4KAP42356 2102 aa14.65□□□□□ -0.06
RTN1-201ENST00000267484 ZNF727A8MUV8 499 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 ECI1P42126 302 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 AFF3P51826 1226 aaKnown RBP14.64□□□□□ -0.07
RTN1-201ENST00000267484 S100A12P80511 92 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 ARL6IP1Q15041 203 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 ZNF239Q16600 458 aaKnown RBP14.64□□□□□ -0.07
RTN1-201ENST00000267484 CRLF2Q9HC73 371 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 NKX2-6A6NCS4 301 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 ST8SIA3O43173 380 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 FBP1P09467 338 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 SRFP11831 508 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 POLR2GP62487 172 aaKnown RBP eCLIP14.64□□□□□ -0.07
RTN1-201ENST00000267484 ZNF385CQ66K41 422 aaPredicted RBP14.64□□□□□ -0.07
RTN1-201ENST00000267484 CEP192Q8TEP8 1941 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 IGHV5-10-1A0A0J9YXX1 117 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 H7C1Q1 480 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 CLN5O75503 358 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 DUSP1P28562 367 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 MAML2Q8IZL2 1156 aaPredicted RBP14.64□□□□□ -0.07
RTN1-201ENST00000267484 FGFBP3Q8TAT2 258 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 MMP24Q9Y5R2 645 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 WDFY4Q6ZS81 3184 aa14.64□□□□□ -0.07
RTN1-201ENST00000267484 ZIC3O60481 467 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 CA11O75493 328 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 RBP2P50120 134 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 GALNT14Q96FL9 552 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 MIOXQ9UGB7 285 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 LOC102725191A0A1B0GVB3 256 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 HIST1H3AP68431 136 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 EWSR1Q01844 656 aaKnown RBP eCLIP14.63□□□□□ -0.07
RTN1-201ENST00000267484 PPA1Q15181 289 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 HIST2H3PS2Q5TEC6 136 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 RTL6Q6ICC9 239 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 HIST2H3AQ71DI3 136 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 PIGCQ92535 297 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 CCDC74BQ96LY2 380 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 SLC35B3Q9H1N7 401 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 SMIM6P0DI80 62 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 HOXB1P14653 301 aaPredicted RBP14.63□□□□□ -0.07
RTN1-201ENST00000267484 ZNF32P17041 273 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 PAX6P26367 422 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 HMGN3Q15651 99 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 RNF212Q495C1 297 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 FAM209BQ5JX69 171 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 TCEAL3Q969E4 200 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 ZNF442Q9H7R0 627 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 FOXD3Q9UJU5 478 aaPredicted RBP14.63□□□□□ -0.07
RTN1-201ENST00000267484 DKKL1Q9UK85 242 aa14.63□□□□□ -0.07
RTN1-201ENST00000267484 HSPB6O14558 160 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 TP53I11O14683 189 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 OR7C1O76099 320 aaPredicted RBP14.62□□□□□ -0.07
RTN1-201ENST00000267484 NRASP01111 189 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 CRYGSP22914 178 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 NPBWR2P48146 333 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 HAGHQ16775 308 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 LGI3Q8N145 548 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 TMEM217Q8N7C4 229 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 NTNG2Q96CW9 530 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 PROK2Q9HC23 129 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 FAM186AA6NE01 2351 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 IGSF23A1L1A6 192 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 CST7O76096 145 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 HTR5AP47898 357 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 ACER2Q5QJU3 275 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 CALHM1Q8IU99 346 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 OSR2Q8N2R0 312 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 C3orf80F5H4A9 247 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 IGHV3-9P01782 118 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 UCP2P55851 309 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 RPS23P62266 143 aaKnown RBP14.62□□□□□ -0.07
RTN1-201ENST00000267484 ZNF92Q03936 586 aa14.62□□□□□ -0.07
RTN1-201ENST00000267484 SPIN3Q5JUX0 258 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms