RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 COX5BP10606 129 aa14.33□□□□□ -0.12
GPC1-201ENST00000264039 GALR1P47211 349 aa14.33□□□□□ -0.12
GPC1-201ENST00000264039 TMEM50BP56557 158 aa14.33□□□□□ -0.12
GPC1-201ENST00000264039 NUTF2P61970 127 aaKnown RBP14.33□□□□□ -0.12
GPC1-201ENST00000264039 ZNF92Q03936 586 aa14.33□□□□□ -0.12
GPC1-201ENST00000264039 ASPHD2Q6ICH7 369 aa14.33□□□□□ -0.12
GPC1-201ENST00000264039 ALKBH2Q6NS38 261 aa14.33□□□□□ -0.12
GPC1-201ENST00000264039 RNF24Q9Y225 148 aa14.33□□□□□ -0.12
GPC1-201ENST00000264039 FAM221BA6H8Z2 402 aa14.33□□□□□ -0.12
GPC1-201ENST00000264039 DVL1O14640 695 aa14.33□□□□□ -0.12
GPC1-201ENST00000264039 ADAM20O43506 726 aa14.33□□□□□ -0.12
GPC1-201ENST00000264039 MELTFP08582 738 aa14.33□□□□□ -0.12
GPC1-201ENST00000264039 ANKUB1A6NFN9 424 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 SIAH2O43255 324 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 WNT5AP41221 380 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 AADACL3Q5VUY0 350 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 C1QL2Q7Z5L3 287 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 ZNF709Q8N972 641 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 OR1P1Q8NH06 330 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 UBALD1Q8TB05 177 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 BAHD1Q8TBE0 780 aaPredicted RBP14.32□□□□□ -0.12
GPC1-201ENST00000264039 ZNF107Q9UII5 783 aaPredicted RBP14.32□□□□□ -0.12
GPC1-201ENST00000264039 PILRAQ9UKJ1 303 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 SRPK3Q9UPE1 567 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 K7EQS6 105 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 ADH1BP00325 375 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 KRTDAPP60985 99 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 ZNF658BQ4V348 819 aaPredicted RBP14.32□□□□□ -0.12
GPC1-201ENST00000264039 BTNL3Q6UXE8 466 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 NT5CQ8TCD5 201 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 RSG1Q9BU20 258 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 HDAC8Q9BY41 377 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 ZNF286AQ9HBT8 521 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 OSGIN2Q9Y236 505 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 CDH23Q9H251 3354 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.32□□□□□ -0.12
GPC1-201ENST00000264039 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.32□□□□□ -0.12
GPC1-201ENST00000264039 LOC390937A0A1W2PQ73 354 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 IFITM10A6NMD0 228 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 RPLP1P05386 114 aaKnown RBP14.32□□□□□ -0.12
GPC1-201ENST00000264039 PTTG1IPP53801 180 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 FAM3BP58499 235 aaPredicted RBP14.32□□□□□ -0.12
GPC1-201ENST00000264039 RUNX3Q13761 415 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 HERPUD1Q15011 391 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 CXorf66Q5JRM2 361 aaPredicted RBP14.32□□□□□ -0.12
GPC1-201ENST00000264039 C1orf100Q5SVJ3 147 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 Q6ZSR6 202 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 NAA60Q9H7X0 242 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 METTL7AQ9H8H3 244 aa14.32□□□□□ -0.12
GPC1-201ENST00000264039 SPINK4O60575 86 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 COL10A1Q03692 680 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 RTP5Q14D33 572 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 SPANXN5Q5MJ07 72 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 PECRQ9BY49 303 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 SLC2A9Q9NRM0 540 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 PLA2G2EQ9NZK7 142 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 MMACHCQ9Y4U1 282 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 ISXQ2M1V0 245 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 ABHD5Q8WTS1 349 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.31□□□□□ -0.12
GPC1-201ENST00000264039 PIGCQ92535 297 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 NOL4LQ96MY1 436 aaPredicted RBP14.31□□□□□ -0.12
GPC1-201ENST00000264039 MCTS1Q9ULC4 181 aaKnown RBP14.31□□□□□ -0.12
GPC1-201ENST00000264039 TRBV6-7A0A0A0MS04 114 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 DDAH2O95865 285 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 TNFP01375 233 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 HOXC4P09017 264 aaPredicted RBP14.31□□□□□ -0.12
GPC1-201ENST00000264039 OR3A1P47881 315 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 GLIPR1P48060 266 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 UBE2G2P60604 165 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 ZNF574Q6ZN55 896 aaPredicted RBP14.31□□□□□ -0.12
GPC1-201ENST00000264039 H1FNTQ75WM6 255 aaPredicted RBP14.31□□□□□ -0.12
GPC1-201ENST00000264039 OR8B12Q8NGG6 310 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 GNPNAT1Q96EK6 184 aaPredicted RBP14.31□□□□□ -0.12
GPC1-201ENST00000264039 OR51I2Q9H344 312 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 V9GYS6 101 aa14.31□□□□□ -0.12
GPC1-201ENST00000264039 HSPB2A8KAH6 182 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 C9J4A7 227 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 METTL15P1P0C7V9 234 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 CEBPEQ15744 281 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 HSPB2Q16082 182 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 IZUMO4Q1ZYL8 232 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 VAX1Q5SQQ9 334 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 FAM69BQ5VUD6 431 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 DPPA3Q6W0C5 159 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 OR2AE1Q8NHA4 323 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 EGLN1Q9GZT9 426 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 FOXD3Q9UJU5 478 aaPredicted RBP14.3□□□□□ -0.12
GPC1-201ENST00000264039 ZNF407Q9C0G0 2248 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 OR4A8P0C604 315 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 P2RY6Q15077 328 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 SLC16A14Q7RTX9 510 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 ARHGEF39Q8N4T4 335 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 VN1R17PQ8TDU5 208 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 NAT6Q93015 286 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 RAB24Q969Q5 203 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 ZBP1Q9H171 429 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 PLEKHF2Q9H8W4 249 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 KIAA1456Q9P272 454 aa14.3□□□□□ -0.12
GPC1-201ENST00000264039 IGKV1D-8A0A087WSZ0 117 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms