RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ALPK2Q86TB3 2170 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 ADAM10O14672 748 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 OR2C1O95371 312 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 MPC2O95563 127 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 IFI6P09912 130 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 GGNBP1Q5YKI7 109 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 UBAC2Q8NBM4 344 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 CXXC4Q9H2H0 198 aa12.32□□□□□ -0.44
CDH3-201ENST00000264012 LSM2Q9Y333 95 aaKnown RBP12.32□□□□□ -0.44
CDH3-201ENST00000264012 C3orf80F5H4A9 247 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 PLA2G10O15496 165 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 SP1P08047 785 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 OR5AC1P0C628 307 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 SLC25A6P12236 298 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 TMEM11P17152 192 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 NDUFA6P56556 154 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 ZNF79Q15937 498 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 TRMT61AQ96FX7 289 aaKnown RBP12.31□□□□□ -0.44
CDH3-201ENST00000264012 SOX7Q9BT81 388 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 CST4P01036 141 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 FGF7P21781 194 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 OR3A1P47881 315 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 LYG1Q8N1E2 194 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 RFLNBQ8N5W9 214 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 CCL17Q92583 94 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 TUBG2Q9NRH3 451 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 LTBP1Q14766 1721 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 TDRD6O60522 2096 aaKnown RBP12.31□□□□□ -0.44
CDH3-201ENST00000264012 GEMIN2O14893 280 aaKnown RBP12.31□□□□□ -0.44
CDH3-201ENST00000264012 PPP1R2P9O14990 202 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 RRASP10301 218 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 FGF5P12034 268 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 IL11P20809 199 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 LPAR6P43657 344 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 IFITM3Q01628 133 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 C19orf57Q0VDD7 668 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 HLXQ14774 488 aaPredicted RBP12.31□□□□□ -0.44
CDH3-201ENST00000264012 ADAT3Q96EY9 351 aaPredicted RBP12.31□□□□□ -0.44
CDH3-201ENST00000264012 HES7Q9BYE0 225 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 PILRBQ9UKJ0 227 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 DSPPQ9NZW4 1301 aa12.31□□□□□ -0.44
CDH3-201ENST00000264012 A0A1W2PR77 199 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 FCGR3BO75015 233 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 VSIG8P0DPA2 414 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 RPL11P62913 178 aaKnown RBP12.3□□□□□ -0.44
CDH3-201ENST00000264012 Q3ZCU0 254 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 BAGE3Q86Y29 109 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 BAGE2Q86Y30 109 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 MRGPRDQ8TDS7 321 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 CTHRC1Q96CG8 243 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 POM121L2Q96KW2 1035 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 CNOT1A5YKK6 2376 aaKnown RBP12.3□□□□□ -0.44
CDH3-201ENST00000264012 UBE2L5PA0A1B0GUS4 154 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 PPP5D1E7EU14 171 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 ST8SIA5O15466 376 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 GNG10P50151 68 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 ASCL1P50553 236 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 COL19A1Q14993 1142 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 BATFQ16520 125 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 RPS4Y2Q8TD47 263 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 CA5BP1Q8WTZ4 195 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 ADAM19Q9H013 955 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 CCDC88CQ9P219 2028 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 TXNDC12O95881 172 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 ANKRD34CP0C6C1 535 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 SCGB2A2Q13296 93 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 KIAA0141Q14154 515 aaPredicted RBP12.3□□□□□ -0.44
CDH3-201ENST00000264012 IGFBP7Q16270 282 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 HIKESHIQ53FT3 197 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 TRAT1Q6PIZ9 186 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 BHLHA15Q7RTS1 189 aaPredicted RBP12.3□□□□□ -0.44
CDH3-201ENST00000264012 SMIM7Q9BQ49 75 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 NARFLQ9H6Q4 476 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 IGHV1-45A0A0A0MS14 117 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 IGHV3-43A0A0B4J1X8 118 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 IGHV3-43DP0DP04 118 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 KIR3DL2P43630 455 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 INPP5JQ15735 1006 aaPredicted RBP12.3□□□□□ -0.44
CDH3-201ENST00000264012 FHL5Q5TD97 284 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 STUMQ69YW2 141 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 FAHD2BQ6P2I3 314 aaPredicted RBP12.3□□□□□ -0.44
CDH3-201ENST00000264012 MOB3BQ86TA1 216 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 FAHD2AQ96GK7 314 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 GPX7Q96SL4 187 aaPredicted RBP12.3□□□□□ -0.44
CDH3-201ENST00000264012 TTTY12Q9BZ98 90 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 TGIF2Q9GZN2 237 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 CHST5Q9GZS9 411 aa12.3□□□□□ -0.44
CDH3-201ENST00000264012 NXF2Q9GZY0 626 aaKnown RBP12.3□□□□□ -0.44
CDH3-201ENST00000264012 CLN5O75503 358 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 ADAP1O75689 374 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 PNPP00491 289 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 RHOFQ9HBH0 211 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.29□□□□□ -0.44
CDH3-201ENST00000264012 WDR90Q96KV7 1748 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 SPTBN2O15020 2390 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 LOC285556D6RIA3 1793 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 TRIM77I1YAP6 450 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 SCGB1D1O95968 90 aa12.29□□□□□ -0.44
CDH3-201ENST00000264012 CTSDP07339 412 aaPredicted RBP12.29□□□□□ -0.44
CDH3-201ENST00000264012 TIGITQ495A1 244 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms