RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 SLC35A1P78382 337 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 KCTD18Q6PI47 426 aaPredicted RBP12.49□□□□□ -0.41
SCARF1-201ENST00000263071 MEX3BQ6ZN04 569 aaKnown RBP12.49□□□□□ -0.41
SCARF1-201ENST00000263071 SLC25A42Q86VD7 318 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 SLC22A18ASQ8N1D0 253 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 SLC26A10Q8NG04 563 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 OTOSQ8NHW6 89 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 CTHRC1Q96CG8 243 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 AQP10Q96PS8 301 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 PRRT1Q99946 306 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 NICN1Q9BSH3 213 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 NMES1Q9C002 83 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 ZNF552Q9H707 407 aaPredicted RBP12.49□□□□□ -0.41
SCARF1-201ENST00000263071 SLC2A4RGQ9NR83 387 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 PLSCR2Q9NRY7 297 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 LRFN1Q9P244 771 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 KLK13Q9UKR3 277 aa12.49□□□□□ -0.41
SCARF1-201ENST00000263071 DOCK8Q8NF50 2099 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 TRBV6-7A0A0A0MS04 114 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 NPIPA5E9PKD4 350 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 CSTBP04080 98 aaKnown RBP12.48□□□□□ -0.41
SCARF1-201ENST00000263071 COL10A1Q03692 680 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 ARL6IP1Q15041 203 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 CDC20BQ86Y33 519 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 ZNF701Q9NV72 531 aaPredicted RBP12.48□□□□□ -0.41
SCARF1-201ENST00000263071 NPIPA1Q9UND3 350 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 YBX2Q9Y2T7 364 aaKnown RBP12.48□□□□□ -0.41
SCARF1-201ENST00000263071 A6NIZ1 184 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 PNMTP11086 282 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 EN2P19622 333 aaPredicted RBP12.48□□□□□ -0.41
SCARF1-201ENST00000263071 RAB32Q13637 225 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 PRTGQ2VWP7 1150 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 ORAOV1Q8WV07 137 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 ZNF700Q9H0M5 742 aa12.48□□□□□ -0.41
SCARF1-201ENST00000263071 IGHV5-51A0A0C4DH38 117 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 NPIPA2E9PIF3 369 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 SFTPDP35247 375 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 TMEM268Q5VZI3 342 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 LHFPL4Q7Z7J7 247 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 ATG4DQ86TL0 474 aaPredicted RBP12.47□□□□□ -0.41
SCARF1-201ENST00000263071 OR5L1Q8NGL2 311 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 TMEM37Q8WXS4 190 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 MCHR2Q969V1 340 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 HHLA2Q9UM44 414 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 CACNA1EQ15878 2313 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 TLCD2A6NGC4 264 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 CLDN34H7C241 214 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 SLC17A2O00624 439 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 VAMP3Q15836 100 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 TMEM95Q3KNT9 176 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 ABHD12BQ7Z5M8 362 aaPredicted RBP12.47□□□□□ -0.41
SCARF1-201ENST00000263071 TMEM229BQ8NBD8 167 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 ZNF738Q8NE65 137 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 SNIP1Q8TAD8 396 aaKnown RBP12.47□□□□□ -0.41
SCARF1-201ENST00000263071 ASB5Q8WWX0 329 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 SLC17A5Q9NRA2 495 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 FBXL17Q9UF56 701 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 FOXD3Q9UJU5 478 aaPredicted RBP12.47□□□□□ -0.41
SCARF1-201ENST00000263071 SRPK3Q9UPE1 567 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 PPP5D1E7EU14 171 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 MELTFP08582 738 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 TDGF1P13385 188 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 FUT3P21217 361 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 FCGR2CP31995 323 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 NHLH1Q02575 133 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 ZNF880Q6PDB4 577 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 OGFOD3Q6PK18 319 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 KLHL24Q6TFL4 600 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 LFNGQ8NES3 379 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 MS4A10Q96PG2 267 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 PCNX3Q9H6A9 2034 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 CNTD2Q9H8S5 307 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 HIF3AQ9Y2N7 669 aa12.47□□□□□ -0.41
SCARF1-201ENST00000263071 KNTC1P50748 2209 aa12.46□□□□□ -0.41
SCARF1-201ENST00000263071 PRSS37A4D1T9 235 aa12.46□□□□□ -0.41
SCARF1-201ENST00000263071 DUS4LO95620 317 aaKnown RBP12.46□□□□□ -0.41
SCARF1-201ENST00000263071 RPL12P30050 165 aaKnown RBP12.46□□□□□ -0.41
SCARF1-201ENST00000263071 RANP62826 216 aaKnown RBP12.46□□□□□ -0.41
SCARF1-201ENST00000263071 MMDQ15546 238 aa12.46□□□□□ -0.41
SCARF1-201ENST00000263071 SMIM12Q96EX1 92 aa12.46□□□□□ -0.41
SCARF1-201ENST00000263071 NMNAT2Q9BZQ4 307 aa12.46□□□□□ -0.41
SCARF1-201ENST00000263071 TMED7-TICAM2A0A0A6YYA0 188 aa12.46□□□□□ -0.41
SCARF1-201ENST00000263071 BORCS7-ASMTA0A0B4J1R7 106 aa12.46□□□□□ -0.41
SCARF1-201ENST00000263071 ZNHIT1O43257 154 aa12.46□□□□□ -0.41
SCARF1-201ENST00000263071 OR3A2P47893 321 aa12.46□□□□□ -0.41
SCARF1-201ENST00000263071 EMP2P54851 167 aa12.46□□□□□ -0.41
SCARF1-201ENST00000263071 OR51E1Q8TCB6 317 aa12.46□□□□□ -0.41
SCARF1-201ENST00000263071 LMF2Q9BU23 707 aaKnown RBP12.46□□□□□ -0.41
SCARF1-201ENST00000263071 ZNF878C9JN71 531 aa12.46□□□□□ -0.42
SCARF1-201ENST00000263071 ABHD16AO95870 558 aa12.46□□□□□ -0.42
SCARF1-201ENST00000263071 ZNF20P17024 532 aa12.46□□□□□ -0.42
SCARF1-201ENST00000263071 HSD11B1P28845 292 aa12.46□□□□□ -0.42
SCARF1-201ENST00000263071 PPP1CCP36873 323 aaKnown RBP12.46□□□□□ -0.42
SCARF1-201ENST00000263071 MMP16P51512 607 aa12.46□□□□□ -0.42
SCARF1-201ENST00000263071 UBE2G2P60604 165 aa12.46□□□□□ -0.42
SCARF1-201ENST00000263071 OPN5Q6U736 354 aa12.46□□□□□ -0.42
SCARF1-201ENST00000263071 GRINAQ7Z429 371 aa12.46□□□□□ -0.42
SCARF1-201ENST00000263071 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.42
SCARF1-201ENST00000263071 MEMO1Q9Y316 297 aa12.46□□□□□ -0.42
SCARF1-201ENST00000263071 FANCMQ8IYD8 2048 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms