RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 MINOS1Q5TGZ0 78 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 TMEM244Q5VVB8 128 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 ZNF626Q68DY1 528 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 C12orf73Q69YU5 71 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 OR52W1Q6IF63 320 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 CENPVQ7Z7K6 275 aaPredicted RBP9.9□□□□□ -0.82
TRAF4-202ENST00000262396 CATSPERDQ86XM0 798 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 NDUFA11Q86Y39 141 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 FAM58AQ8N1B3 248 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 TPRX1Q8N7U7 411 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 UTP4Q969X6 686 aaKnown RBP9.9□□□□□ -0.82
TRAF4-202ENST00000262396 C10orf35Q96D05 121 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 MRPL48Q96GC5 212 aaKnown RBP9.9□□□□□ -0.82
TRAF4-202ENST00000262396 CLEC7AQ9BXN2 247 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 GAL3ST2Q9H3Q3 398 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 ZNF702PQ9H963 129 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 EXOSC4Q9NPD3 245 aaKnown RBP9.9□□□□□ -0.82
TRAF4-202ENST00000262396 ING3Q9NXR8 418 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 MTCH1Q9NZJ7 389 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 GSTK1Q9Y2Q3 226 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 LINC00312Q9Y6C7 94 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 SESN1Q9Y6P5 492 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 MINOS1-NBL1R4GNA1 71 aa9.9□□□□□ -0.82
TRAF4-202ENST00000262396 VWFP04275 2813 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 NOTCH1P46531 2555 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 LOC107986453A0A1B0GWG9 222 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 DAPL1A0PJW8 107 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 MEGF11A6BM72 1044 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 A6NDX4 124 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 FAM90A8PA6NJQ4 464 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 VGLL3A8MV65 326 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 SIRPB1O00241 398 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 SH2D1BO14796 132 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 MGST3O14880 152 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 PF4P02776 101 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 ZNF44P15621 663 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 AZGP1P25311 298 aaKnown RBP9.89□□□□□ -0.83
TRAF4-202ENST00000262396 ERVK11-1P61568 191 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 TP53I3Q53FA7 332 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 KDM4DQ6B0I6 523 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 LHFPL2Q6ZUX7 228 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 SSX6Q7RTT6 188 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 C11orf42Q8N5U0 333 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 OR11H6Q8NGC7 330 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 OR8J1Q8NGP2 316 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 ZNF596Q8TC21 504 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 CFHR4Q92496 578 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 MYCBPQ99417 103 aaPredicted RBP9.89□□□□□ -0.83
TRAF4-202ENST00000262396 CIB1Q99828 191 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 CHST5Q9GZS9 411 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 TMEM133Q9H2Q1 129 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.89□□□□□ -0.83
TRAF4-202ENST00000262396 TGP01266 2768 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 CMYA5Q8N3K9 4069 aa9.89□□□□□ -0.83
TRAF4-202ENST00000262396 IGHV2-26A0A0B4J1V2 119 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 SNTNA6NMZ2 147 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 ODF3BA8MYP8 253 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 CLIC3O95833 236 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 IGHA1P01876 353 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 HTR1AP08908 422 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 BCL3P20749 454 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 CCL1P22362 96 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 EPHA2P29317 976 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 CEACAM3P40198 252 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 BNIP1Q12981 228 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 TMED1Q13445 227 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 BEAN1Q3B7T3 259 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 FBLN7Q53RD9 439 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 C9orf152Q5JTZ5 239 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 RDH10Q8IZV5 341 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 DYNAPQ8N1N2 210 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 ABHD12Q8N2K0 398 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 OR4D6Q8NGJ1 314 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 OR13C3Q8NGS6 347 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 PIFOQ8TCI5 191 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 RFT1Q96AA3 541 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 FGGYQ96C11 551 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 SLC7A6OSQ96CW6 309 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-202ENST00000262396 AJUBAQ96IF1 538 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 CITED2Q99967 270 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-202ENST00000262396 MMP28Q9H239 520 aa9.88□□□□□ -0.83
TRAF4-202ENST00000262396 RBFOX1Q9NWB1 397 aaKnown RBP9.88□□□□□ -0.83
TRAF4-202ENST00000262396 TRBV2A0A0J9YWF9 115 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 TCRBV4S1A1TA0A5B7 111 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 TMEM82A0PJX8 343 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 SAC3D1A6NKF1 404 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 F8VVB4 439 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 F8VWA3 439 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 ZNF737O75373 536 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 ATP5HO75947 161 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 ALX3O95076 343 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 HCKP08631 526 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 ATF1P18846 271 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 MNDAP41218 407 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 DLX6P56179 175 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 P2RX3P56373 397 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 RBM39Q14498 530 aaKnown RBP9.87□□□□□ -0.83
TRAF4-202ENST00000262396 OXLD1Q5BKU9 147 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 SPIN3Q5JUX0 258 aa9.87□□□□□ -0.83
TRAF4-202ENST00000262396 SAMD5Q5TGI4 173 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms