RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 C1QTNF6Q9BXI9 259 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF629Q9UEG4 869 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OPN4Q9UHM6 478 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 PILRAQ9UKJ1 303 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 TIMM9Q9Y5J7 89 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 C16orf97H3BN30 126 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 GOSR1O95249 250 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 HOXD11P31277 338 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 RFC3P40938 356 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 NPBWR1P48145 328 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 CFHR1Q03591 330 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM268Q5VZI3 342 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 THNSL2Q86YJ6 484 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 SFT2D1Q8WV19 159 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 BCL2L2Q92843 193 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM18Q96B42 140 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 CDX2Q99626 313 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 ELOVL1Q9BW60 279 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 CLEC5AQ9NY25 188 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 CHST2Q9Y4C5 530 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 TRAV30A0A087WSZ9 112 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM235A6NFC5 223 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OR5H1A6NKK0 313 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 DAOP14920 347 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 SLC6A1P30531 599 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 GPM6AP51674 278 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 C1orf185Q5T7R7 199 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM215Q68D42 235 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 STPG3Q8N7X2 389 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF441Q8N8Z8 693 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 LHX4Q969G2 390 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 GEMIN2O14893 280 aaKnown RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 HLXQ14774 488 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OR2M3Q8NG83 312 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF721Q8TF20 911 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 SPNS1Q9H2V7 528 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 PILRBQ9UKJ0 227 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 U3KQ87 197 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 MPDZO75970 2070 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 ASPDHA6ND91 283 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 CRYM-AS1A6NIL9 109 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 CHEK1O14757 476 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 KLK10O43240 276 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 B3GALT4O96024 378 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 B4GALT1P15291 398 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 PRDX4Q13162 271 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 IZUMO4Q1ZYL8 232 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 MSRB3Q8IXL7 192 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OR8G5Q8NG78 346 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 OR4Q3Q8NH05 313 aa3.82□□□□□ -1.8
VPS13C-202ENST00000261517 GTF3AQ92664 365 aaKnown RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 TECRQ9NZ01 308 aaKnown RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 PLEKHB1Q9UF11 243 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-202ENST00000261517 SSSCA1O60232 199 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 PLPPR5Q32ZL2 321 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 PHLDA2Q53GA4 152 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 WDR38Q5JTN6 314 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 C9orf50Q5SZB4 431 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 EIF4E3Q8N5X7 224 aaKnown RBP3.81□□□□□ -1.8
VPS13C-202ENST00000261517 NPAS1Q99742 590 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 HES7Q9BYE0 225 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 SLC52A3Q9NQ40 469 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 TREM2Q9NZC2 230 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 TP53BP1Q12888 1972 aaPredicted RBP3.81□□□□□ -1.8
VPS13C-202ENST00000261517 GPANK1O95872 356 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 PCSK6P29122 969 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 HTRA3P83110 453 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 PABPC1L2AQ5JQF8 200 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 UBE3DQ7Z6J8 389 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 SCCPDHQ8NBX0 429 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 RNF7Q9UBF6 113 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ANXA10Q9UJ72 324 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ALPK2Q86TB3 2170 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 A0A1W2PPV9 198 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 SDCBPO00560 298 aaPredicted RBP3.81□□□□□ -1.8
VPS13C-202ENST00000261517 TM4SF5O14894 197 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 OR2C1O95371 312 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 SMIM10L1P0DMW3 83 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 NQO2P16083 231 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ID1P41134 155 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 NCR3LG1Q68D85 454 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 SLC26A10Q8NG04 563 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 SMIM10Q96HG1 83 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 CXCL16Q9H2A7 254 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 OTOL1A6NHN0 477 aaPredicted RBP3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ZFPL1O95159 310 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 SP1P08047 785 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 LGALS7P47929 136 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 GABRA4P48169 554 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 GUCA2AQ02747 115 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 WFDC8Q8IUA0 241 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 SLC35B3Q9H1N7 401 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ZMAT5Q9UDW3 170 aaKnown RBP3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF225Q9UK10 706 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 NCBP2LA6PVI3 153 aaKnown RBP3.81□□□□□ -1.8
VPS13C-202ENST00000261517 TSPAN2O60636 221 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ADAM11O75078 769 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 PGA4P0DJD7 388 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 PGA5P0DJD9 388 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 PTNP21246 168 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms