RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 RPP30P78346 268 aaKnown RBP6.32□□□□□ -1.4
CSDE1-201ENST00000261443 DEFB103AP81534 67 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 ZFP36L1Q07352 338 aaKnown RBP6.32□□□□□ -1.4
CSDE1-201ENST00000261443 ARL6IP1Q15041 203 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 MPV17LQ2QL34 196 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 RD3Q7Z3Z2 195 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 KIR2DL5AQ8N109 375 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 ZNF248Q8NDW4 579 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 OR5L2Q8NGL0 311 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 OR5C1Q8NGR4 320 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 TMEM171Q8WVE6 324 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 TMEM37Q8WXS4 190 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 FAM71F1Q96KD3 344 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-201ENST00000261443 ZNF385AQ96PM9 386 aaKnown RBP6.32□□□□□ -1.4
CSDE1-201ENST00000261443 CFHR5Q9BXR6 569 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 P4HTMQ9NXG6 502 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 ATG2BQ96BY7 2078 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 ATG2AQ2TAZ0 1938 aa6.32□□□□□ -1.4
CSDE1-201ENST00000261443 PHF3Q92576 2039 aaKnown RBP6.32□□□□□ -1.4
CSDE1-201ENST00000261443 COL4A2P08572 1712 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ZNF850A8MQ14 1090 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ZNF732B4DXR9 585 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 PLPP3O14495 311 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 RRP8O43159 456 aaKnown RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ZNF205O95201 554 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 WISP1O95388 367 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ONECUT2O95948 504 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 CTHP32929 405 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 GALNSP34059 522 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 SLC6A8P48029 635 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 POC1BQ8TC44 478 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 LRRC3BQ96PB8 259 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 HDHD3Q9BSH5 251 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ANGPTL4Q9BY76 406 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 PLEKHF2Q9H8W4 249 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ELL3Q9HB65 397 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 LPAR2Q9HBW0 351 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 FGF22Q9HCT0 170 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 SERGEFQ9UGK8 458 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 NXT1Q9UKK6 140 aaKnown RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 MCTS1Q9ULC4 181 aaKnown RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 DOCK8Q8NF50 2099 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 CHD3Q12873 2000 aaKnown RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 C17orf51A8MQB3 221 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ZNF705FA8MVS1 300 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 TCF21O43680 179 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 CST7O76096 145 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ZNF705DP0CH99 300 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ZNF705BP0CI00 300 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 GP1BBP13224 206 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 IRF2P14316 349 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 TRA2AQ13595 282 aaKnown RBP eCLIP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 BATFQ16520 125 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 CDCP2Q5VXM1 449 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 C6orf201Q7Z4U5 140 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 C1QL2Q7Z5L3 287 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 TMEM217Q8N7C4 229 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 LRTM2Q8N967 370 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 SUMF1Q8NBK3 374 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 NEK7Q8TDX7 302 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 TMEM170AQ8WVE7 144 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 WFIKKN1Q96NZ8 548 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ADOQ96SZ5 270 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 LIME1Q9H400 295 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 DECR2Q9NUI1 292 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 PLEKHJ1Q9NW61 149 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 NAGKQ9UJ70 344 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 WDFY4Q6ZS81 3184 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 IGKV1D-43A0A0B4J1Z2 117 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 A0A1W2PP55 124 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ETV2O00321 342 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 PHF1O43189 567 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 IGHMP01871 453 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 PFN1P07737 140 aaKnown RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 OR10J1P30954 320 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 DYNLT3P51808 116 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ADIRFQ15847 76 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 CLEC12BQ2HXU8 276 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 MEX3BQ6ZN04 569 aaKnown RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 MRPL52Q86TS9 123 aaKnown RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 PRR22Q8IZ63 422 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 OR4D5Q8NGN0 318 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 BAHD1Q8TBE0 780 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 GPR119Q8TDV5 335 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 TSLPQ969D9 159 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 OR5B12Q96R08 314 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 APOOQ9BUR5 198 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 RTN4RQ9BZR6 473 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 PRTFDC1Q9NRG1 225 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 CISD1Q9NZ45 108 aaKnown RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 THAP10Q9P2Z0 257 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-201ENST00000261443 ANXA10Q9UJ72 324 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 FUT9Q9Y231 359 aa6.31□□□□□ -1.4
CSDE1-201ENST00000261443 PCNX3Q9H6A9 2034 aa6.3□□□□□ -1.4
CSDE1-201ENST00000261443 TMED7-TICAM2A0A0A6YYA0 188 aa6.3□□□□□ -1.4
CSDE1-201ENST00000261443 PRSS38A1L453 326 aa6.3□□□□□ -1.4
CSDE1-201ENST00000261443 B4E171 279 aa6.3□□□□□ -1.4
CSDE1-201ENST00000261443 NPIPA5E9PKD4 350 aa6.3□□□□□ -1.4
CSDE1-201ENST00000261443 IFNL4K9M1U5 179 aa6.3□□□□□ -1.4
CSDE1-201ENST00000261443 SIAH2O43255 324 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms