RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ZNF283Q8N7M2 679 aa10.04□□□□□ -0.8
TROAP-201ENST00000257909 CCDC71LQ8N9Z2 235 aa10.04□□□□□ -0.8
TROAP-201ENST00000257909 DDIT4LQ96D03 193 aa10.04□□□□□ -0.8
TROAP-201ENST00000257909 LIME1Q9H400 295 aa10.04□□□□□ -0.8
TROAP-201ENST00000257909 C11orf1Q9H5F2 150 aa10.04□□□□□ -0.8
TROAP-201ENST00000257909 ELL3Q9HB65 397 aaPredicted RBP10.04□□□□□ -0.8
TROAP-201ENST00000257909 A0A1B0GU03 582 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 GCGP01275 180 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 CLRN1P58418 232 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 GRB2P62993 217 aaKnown RBP10.03□□□□□ -0.8
TROAP-201ENST00000257909 HAS2Q92819 552 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 GABRG3Q99928 467 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 HDHD3Q9BSH5 251 aaPredicted RBP10.03□□□□□ -0.8
TROAP-201ENST00000257909 WWTR1Q9GZV5 400 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 CDH20Q9HBT6 801 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 NXT1Q9UKK6 140 aaKnown RBP10.03□□□□□ -0.8
TROAP-201ENST00000257909 SLC7A11Q9UPY5 501 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 PIAS3Q9Y6X2 628 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 A0A1W2PNV4 684 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 IGSF23A1L1A6 192 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 DFFBO76075 338 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 FCGR2AP12318 317 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 CEACAM1P13688 526 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 FUT3P21217 361 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 SRPXP78539 464 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 HNF4GQ14541 408 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 SLC10A1Q14973 349 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 PHLDA2Q53GA4 152 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 TSPO2Q5TGU0 170 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 Q6ZSR6 202 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 OR5L1Q8NGL2 311 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 NPRL2Q8WTW4 380 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 PP6455Q8WZ26 134 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 TSLPQ969D9 159 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 Q96M66 194 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 DDA1Q9BW61 102 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 CTDSP1Q9GZU7 261 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 SERINC1Q9NRX5 453 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 ALKBH4Q9NXW9 302 aa10.03□□□□□ -0.8
TROAP-201ENST00000257909 COL5A1P20908 1838 aaPredicted RBP10.03□□□□□ -0.8
TROAP-201ENST00000257909 IGKV3D-11A0A0A0MRZ8 115 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 LOC102723971A0A1B0GUV8 181 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 GEMIN2O14893 280 aaKnown RBP10.02□□□□□ -0.8
TROAP-201ENST00000257909 PHF1O43189 567 aaPredicted RBP10.02□□□□□ -0.8
TROAP-201ENST00000257909 CYTIPO60759 359 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 NKX2-1P43699 371 aaPredicted RBP10.02□□□□□ -0.8
TROAP-201ENST00000257909 UCP3P55916 312 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 FXYD4P59646 89 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 CMTM1Q8IZ96 169 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 SLC35G3Q8N808 338 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 NOXO1Q8NFA2 376 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 ABHD14BQ96IU4 210 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 SPIN2AQ99865 258 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 SPIN2BQ9BPZ2 258 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 CABLES2Q9BTV7 478 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 CRISPLD2Q9H0B8 497 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 NKX2-4Q9H2Z4 354 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 PNRC2Q9NPJ4 139 aaKnown RBP10.02□□□□□ -0.8
TROAP-201ENST00000257909 LYRM2Q9NU23 88 aaPredicted RBP10.02□□□□□ -0.8
TROAP-201ENST00000257909 COPS7AQ9UBW8 275 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 RFNGQ9Y644 331 aa10.02□□□□□ -0.8
TROAP-201ENST00000257909 TRAV1-1A0A0B4J248 108 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 ANKUB1A6NFN9 424 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 RER1O15258 196 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 IGHG1P01857 330 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 AMBPP02760 352 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 SNRPCP09234 159 aaKnown RBP10.02□□□□□ -0.81
TROAP-201ENST00000257909 COX5BP10606 129 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 HOXB2P14652 356 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 BAXQ07812 192 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 TMEM252Q8N6L7 170 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 OR10A7Q8NGE5 316 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 OR5C1Q8NGR4 320 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 TMEM171Q8WVE6 324 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 PGAM5Q96HS1 289 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 PLA2G2FQ9BZM2 168 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 METTL9Q9H1A3 318 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 OR14J1Q9UGF5 321 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 B3GALT1Q9Y5Z6 326 aa10.02□□□□□ -0.81
TROAP-201ENST00000257909 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 LIPT2A6NK58 231 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 DHRS3O75911 302 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 IGLV3-1P01715 115 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 RAB4AP20338 218 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 VAMP2P63027 116 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 TNFRSF9Q07011 255 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 DMRTC1Q5HYR2 192 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 COA6Q5JTJ3 125 aaKnown RBP10.01□□□□□ -0.81
TROAP-201ENST00000257909 FAM90A2PQ658T7 463 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 OR1P1Q8NH06 330 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 SRD5A3Q9H8P0 318 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 IL23AQ9NPF7 189 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 V9GYS6 101 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 KIAA0100Q14667 2235 aaKnown RBP10.01□□□□□ -0.81
TROAP-201ENST00000257909 A0A1W2PQF6 199 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 VSTM2BA6NLU5 285 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 CELA2BP08218 269 aaPredicted RBP10.01□□□□□ -0.81
TROAP-201ENST00000257909 PGA3P0DJD8 388 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 PNLIPP16233 465 aa10.01□□□□□ -0.81
TROAP-201ENST00000257909 COL9A1P20849 921 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms