RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 DOK5Q9P104 306 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 KCNIP3Q9Y2W7 256 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 STRAPQ9Y3F4 350 aaKnown RBP11.64□□□□□ -0.55
H3F3B-201ENST00000254810 IGHV1OR15-9A0A0B4J2B8 117 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 IGKV1-12A0A0C4DH73 117 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 A0A0U1RQV5 110 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 SLC33A1O00400 549 aaPredicted RBP11.64□□□□□ -0.55
H3F3B-201ENST00000254810 GEMIN2O14893 280 aaKnown RBP11.64□□□□□ -0.55
H3F3B-201ENST00000254810 ST8SIA3O43173 380 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 PHF1O43189 567 aaPredicted RBP11.64□□□□□ -0.55
H3F3B-201ENST00000254810 IFNA17P01571 189 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 IGKV1D-12P01611 117 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 HEXBP07686 556 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 EPHA1P21709 976 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 ATP6V0CP27449 155 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 RND3P61587 244 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 ODF3L1Q8IXM7 274 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 ABCA7Q8IZY2 2146 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 LRTM2Q8N967 370 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 ZNF383Q8NA42 475 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 ADPRHL1Q8NDY3 354 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 PBDC1Q9BVG4 233 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 METTL7AQ9H8H3 244 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 DMRT1Q9Y5R6 373 aa11.64□□□□□ -0.55
H3F3B-201ENST00000254810 TGIF2-C20orf24A0A0A6YYL0 155 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 NKX2-6A6NCS4 301 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 RBFOX3A6NFN3 312 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 CCDC85CA6NKD9 419 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 AQP7P3A6NL99 342 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 LMO7DNF2Z398 122 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 DUSP1P28562 367 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 RAB2AP61019 212 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 OR10AD1Q8NGE0 317 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 PP6455Q8WZ26 134 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 LIPGQ9Y5X9 500 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 ADAMTS20P59510 1910 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 ZNF729A6NN14 1252 aaPredicted RBP11.63□□□□□ -0.55
H3F3B-201ENST00000254810 SLC34A2O95436 690 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 CD63P08962 238 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 MSR1P21757 451 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 RAB5CP51148 216 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 PPA1Q15181 289 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 ELOBQ15370 118 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 HIKESHIQ53FT3 197 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 PDZD11Q5EBL8 140 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 PRAMEF20Q5VT98 475 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 OR2G3Q8NGZ4 309 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 MAGT1Q9H0U3 335 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 GLRX2Q9NS18 164 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 FREM2Q5SZK8 3169 aa11.63□□□□□ -0.55
H3F3B-201ENST00000254810 CCDC163A0A0D9SF12 145 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 A0A1B0GW64 132 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 M0R135 149 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 SRP19P09132 144 aaKnown RBP11.62□□□□□ -0.55
H3F3B-201ENST00000254810 GPX4P36969 197 aaPredicted RBP11.62□□□□□ -0.55
H3F3B-201ENST00000254810 CDX1P47902 265 aaPredicted RBP11.62□□□□□ -0.55
H3F3B-201ENST00000254810 ZNF133P52736 654 aaPredicted RBP11.62□□□□□ -0.55
H3F3B-201ENST00000254810 RAB1AP62820 205 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 IL13RA2Q14627 380 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 RSU1Q15404 277 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 HIST2H3AQ71DI3 136 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 FBXL14Q8N1E6 418 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 ZNF799Q96GE5 643 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 RHOVQ96L33 236 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 UCN2Q96RP3 112 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 NXPH3O95157 252 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 AADACP22760 399 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 OTX1P32242 354 aaPredicted RBP11.62□□□□□ -0.55
H3F3B-201ENST00000254810 RUNX1Q01196 453 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 CYB561D1Q8N8Q1 229 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 PFDN5Q99471 154 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 SUCNR1Q9BXA5 334 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 NELFAQ9H3P2 528 aa11.62□□□□□ -0.55
H3F3B-201ENST00000254810 NOSIPQ9Y314 301 aaKnown RBP11.62□□□□□ -0.55
H3F3B-201ENST00000254810 CABIN1Q9Y6J0 2220 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 GATCO43716 136 aaKnown RBP11.61□□□□□ -0.55
H3F3B-201ENST00000254810 TMEM50AO95807 157 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 TAGLN2P37802 199 aaKnown RBP11.61□□□□□ -0.55
H3F3B-201ENST00000254810 LSM6P62312 80 aaKnown RBP11.61□□□□□ -0.55
H3F3B-201ENST00000254810 DAZAP2Q15038 168 aaPredicted RBP11.61□□□□□ -0.55
H3F3B-201ENST00000254810 ZNF674Q2M3X9 581 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 SP5Q6BEB4 398 aaPredicted RBP11.61□□□□□ -0.55
H3F3B-201ENST00000254810 GJC3Q8NFK1 279 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 RBM24Q9BX46 236 aaKnown RBP11.61□□□□□ -0.55
H3F3B-201ENST00000254810 METTL9Q9H1A3 318 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 IGLV3-32A0A0A0MS00 114 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 PROB1E7EW31 1015 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 HIST1H2BKO60814 126 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 HIST1H2BJP06899 126 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 SOD3P08294 240 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 HIST1H2BOP23527 126 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 HIST1H2BBP33778 126 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 HIST1H2BDP58876 126 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 HIST1H2BCP62807 126 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 DLK1P80370 383 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 EIF3IQ13347 325 aaKnown RBP11.61□□□□□ -0.55
H3F3B-201ENST00000254810 ICAM4Q14773 271 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 HIST2H2BEQ16778 126 aa11.61□□□□□ -0.55
H3F3B-201ENST00000254810 CXorf66Q5JRM2 361 aaPredicted RBP11.61□□□□□ -0.55
H3F3B-201ENST00000254810 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms