RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 WDR12Q9GZL7 423 aaKnown RBP9.42□□□□□ -0.9
TNFAIP3-201ENST00000237289 PPA2Q9H2U2 334 aa9.42□□□□□ -0.9
TNFAIP3-201ENST00000237289 PPP1R3EQ9H7J1 279 aa9.42□□□□□ -0.9
TNFAIP3-201ENST00000237289 A6NHS1 94 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 S100GP29377 79 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 WDR82Q6UXN9 313 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 NRGNQ92686 78 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 PPIL3Q9H2H8 161 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 RHOFQ9HBH0 211 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 OR5V1Q9UGF6 321 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 TMEM272A0A1B0GTI8 110 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 IGFBP3P17936 291 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 ZNF846Q147U1 533 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 MPV17LQ2QL34 196 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 C1orf100Q5SVJ3 147 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 DTX2Q86UW9 622 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 POC1AQ8NBT0 407 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 CHST6Q9GZX3 395 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 GEMIN2O14893 280 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 WNT9BO14905 357 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 VSIG8P0DPA2 414 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 ADRA2CP18825 462 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 SCAND1P57086 179 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 SEC61A1P61619 476 aaKnown RBP9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 BTNL3Q6UXE8 466 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 TMEM17Q86X19 198 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 CMTM4Q8IZR5 234 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 OR10R2Q8NGX6 335 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 IL1F10Q8WWZ1 152 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 PSMG3-AS1Q96PY0 264 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 WDR13Q9H1Z4 485 aa9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 BEX4Q9NWD9 120 aaPredicted RBP9.41□□□□□ -0.9
TNFAIP3-201ENST00000237289 KNG1P01042 644 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 RAB6AP20340 208 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 COL8A2P25067 703 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 NPBWR2P48146 333 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 PTH2RP49190 550 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 PIGYQ3MUY2 71 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 PYHIN1Q6K0P9 492 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 CCDC107Q8WV48 283 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 LPAR2Q9HBW0 351 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 SLC25A10Q9UBX3 287 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 CHD6Q8TD26 2715 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 TRGV10A0A0A0MS01 117 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 SPINT2O43291 252 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 PDCD6O75340 191 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 CSN2P05814 226 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 IL13RA2Q14627 380 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 ATXN7L3Q14CW9 347 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 LTC4SQ16873 150 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 LINC00596Q86U02 117 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 RPS4Y2Q8TD47 263 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 H7C417 338 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 IGLV3-1P01715 115 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 DANCRP0C864 163 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 SWI5Q1ZZU3 235 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 ACP7Q6ZNF0 438 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 ZNF525Q8N782 197 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 DYNC2LI1Q8TCX1 351 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 NEIL1Q96FI4 390 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 RIMS4Q9H426 269 aaPredicted RBP9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 MTCH1Q9NZJ7 389 aa9.4□□□□□ -0.9
TNFAIP3-201ENST00000237289 SC5DO75845 299 aa9.4□□□□□ -0.91
TNFAIP3-201ENST00000237289 SFTPBP07988 381 aa9.4□□□□□ -0.91
TNFAIP3-201ENST00000237289 RBM11P57052 281 aaKnown RBP9.4□□□□□ -0.91
TNFAIP3-201ENST00000237289 COL10A1Q03692 680 aa9.4□□□□□ -0.91
TNFAIP3-201ENST00000237289 KRBOX4Q5JUW0 171 aa9.4□□□□□ -0.91
TNFAIP3-201ENST00000237289 CD276Q5ZPR3 534 aa9.4□□□□□ -0.91
TNFAIP3-201ENST00000237289 KCNK15Q9H427 330 aa9.4□□□□□ -0.91
TNFAIP3-201ENST00000237289 ZNF286AQ9HBT8 521 aa9.4□□□□□ -0.91
TNFAIP3-201ENST00000237289 ABCB10Q9NRK6 738 aa9.4□□□□□ -0.91
TNFAIP3-201ENST00000237289 GNG12Q9UBI6 72 aa9.4□□□□□ -0.91
TNFAIP3-201ENST00000237289 hADV38S2A0JD32 116 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 TMEM30CPA0ZSE6 113 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 TMEM178BH3BS89 294 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 CD55P08174 381 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 PGA5P0DJD9 388 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 CBX5P45973 191 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 ACTBP60709 375 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 ACTG1P63261 375 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 SRSF1Q07955 248 aaKnown RBP eCLIP9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 MSMPQ1L6U9 139 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 DEFB113Q30KQ7 82 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 A0A0A6YYH2 397 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 A6NJ64 397 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 RPS27AP62979 156 aaKnown RBP9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 METAP1DQ6UB28 335 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 BPIFB2Q8N4F0 458 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 OR5H6Q8NGV6 325 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 DPCDQ9BVM2 203 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 CACNG2Q9Y698 323 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 CDK2P24941 298 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 MRPS10P82664 201 aaKnown RBP9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 Q5PR19 223 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 BRICD5Q6PL45 260 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 LAX1Q8IWV1 398 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 ONECUT1Q9UBC0 465 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 MGAT4AQ9UM21 535 aa9.39□□□□□ -0.91
TNFAIP3-201ENST00000237289 A0A1W2PP11 408 aa9.38□□□□□ -0.91
TNFAIP3-201ENST00000237289 NDUFS8O00217 210 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms