RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 TCTAP57738 103 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 RIGQ13278 110 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 ZNF141Q15928 474 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 OR1L4Q8NGR5 311 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 WSB2Q9NYS7 404 aaPredicted RBP7.33□□□□□ -1.24
APOB-201ENST00000233242 CTXND1A0A1B0GTU2 59 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 PMS2P1A4D2B8 440 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 K7ESM1 405 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 SIAH2O43255 324 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 OR4F17Q8NGA8 305 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 PPIL1Q9Y3C6 166 aa7.33□□□□□ -1.24
APOB-201ENST00000233242 CD82P27701 267 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 BMI1P35226 326 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 GNG3P63215 75 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 VMA21Q3ZAQ7 101 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 ING1Q9UK53 422 aaPredicted RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 PABPC1L2AQ5JQF8 200 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 LEMD1Q68G75 181 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 FER1L6-AS2Q96M78 137 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 WFDC5Q8TCV5 224 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 TIMD4Q96H15 378 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 PLAC1Q9HBJ0 212 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 FGF22Q9HCT0 170 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 OTOFQ9HC10 1997 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 C5orf49A4QMS7 147 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 GEMIN2O14893 280 aaKnown RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 PPM1DO15297 605 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 FCARP24071 287 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 LIMK1P53667 647 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 RPS16P62249 146 aaKnown RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 ZNF385CQ66K41 422 aaPredicted RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 CNTD2Q9H8S5 307 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 LANCL2Q9NS86 450 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 CDC42EP3Q9UKI2 254 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 KCNE3Q9Y6H6 103 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 OR1C1Q15619 314 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 REC114Q7Z4M0 266 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 STARD10Q9Y365 291 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 ZDBF2Q9HCK1 2354 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 PEX11BO96011 259 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 DAOP14920 347 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 RPS27P42677 84 aaKnown RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 WFIKKN1Q96NZ8 548 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 MRM2Q9UI43 246 aaKnown RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 ANKRD34CP0C6C1 535 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 DYNLT3P51808 116 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 FDX2Q6P4F2 183 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 PUSL1Q8N0Z8 303 aaKnown RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 KTI12Q96EK9 354 aaPredicted RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 OR6C1Q96RD1 312 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 PAM16Q9Y3D7 125 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 IDSB3KWA1 339 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 FABP2P12104 132 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 CDKN2AP42771 156 aaKnown RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 LPAR6P43657 344 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 DLK2Q6UY11 383 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 C17orf78Q8N4C9 275 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 CXCL2P19875 107 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 BTF3P20290 206 aaKnown RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 IFITM2Q01629 132 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 FAM219AQ8IW50 185 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 CA5BP1Q8WTZ4 195 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 ADTRPQ96IZ2 230 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 RCC2Q9P258 522 aaKnown RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 RER1O15258 196 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 OR3A1P47881 315 aa7.32□□□□□ -1.24
APOB-201ENST00000233242 ZNF660Q6AZW8 331 aaPredicted RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 ATOH1Q92858 354 aaPredicted RBP7.32□□□□□ -1.24
APOB-201ENST00000233242 PHLPP1O60346 1717 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 MMP16P51512 607 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 SEBOXQ9HB31 216 aaPredicted RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 DICER1Q9UPY3 1922 aaKnown RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 SYNGR2O43760 224 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 CD27P26842 260 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 DUSP13Q9UII6 198 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 OR5B21A6NL26 309 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 CXorf1O96002 111 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 ZNF718Q3SXZ3 478 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 RGS7BPQ6MZT1 257 aaPredicted RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 PCDHGA9Q9Y5G4 932 aaKnown RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 CACNA1GO43497 2377 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 TOGARAM1Q9Y4F4 1720 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 OR4C45A6NMZ5 311 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 CD207Q9UJ71 328 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 PKD1L3Q7Z443 1732 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 APCSP02743 223 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 ST6GAL1P15907 406 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 G6PCP35575 357 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 CCR2P41597 374 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 NHLRC3Q5JS37 347 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 DOLPP1Q86YN1 238 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 HHIPQ96QV1 700 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 DHCR7Q9UBM7 475 aaKnown RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 OR2M5A3KFT3 312 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 ZNF816Q0VGE8 651 aaPredicted RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 HES1Q14469 280 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 TPSD1Q9BZJ3 242 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 ZFP30Q9Y2G7 519 aa7.31□□□□□ -1.24
APOB-201ENST00000233242 MRPS2Q9Y399 296 aaKnown RBP7.31□□□□□ -1.24
APOB-201ENST00000233242 ANKRD55Q3KP44 614 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms