RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 MYO7BQ6PIF6 2116 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 CD300LBA8K4G0 201 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 IGHV3-9P01782 118 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 CTHP32929 405 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 EFNA3P52797 238 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 FOXK1P85037 733 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 MYBPHQ13203 477 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 MRGPRFQ96AM1 343 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 CHST5Q9GZS9 411 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 WFDC1Q9HC57 220 aa12.78□□□□□ -0.36
PRDM4-201ENST00000228437 MCTS1Q9ULC4 181 aaKnown RBP12.78□□□□□ -0.36
PRDM4-201ENST00000228437 IGKV1D-8A0A087WSZ0 117 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 FSTP19883 344 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.77□□□□□ -0.36
PRDM4-201ENST00000228437 IZUMO4Q1ZYL8 232 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 OR4F5Q8NH21 305 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 ZNF524Q96C55 264 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 OR4F4Q96R69 305 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 SRPK3Q9UPE1 567 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 C5orf42Q9H799 3197 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 XIRP2A4UGR9 3374 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 A0A0A6YYD4 124 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 CA3P07451 260 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 HLA-GP17693 338 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 CARD18P57730 90 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 CXorf66Q5JRM2 361 aaPredicted RBP12.77□□□□□ -0.36
PRDM4-201ENST00000228437 VAX1Q5SQQ9 334 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 OR13D1Q8NGV5 346 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.36
PRDM4-201ENST00000228437 ST3GAL6Q9Y274 331 aa12.77□□□□□ -0.36
PRDM4-201ENST00000228437 PLRG1O43660 514 aaKnown RBP12.77□□□□□ -0.37
PRDM4-201ENST00000228437 FOLR2P14207 255 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 COL9A1P20849 921 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 FCARP24071 287 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 TAS2R60P59551 318 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 ERVFRD-1P60508 538 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 ALKBH2Q6NS38 261 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 ZNF709Q8N972 641 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 NAT6Q93015 286 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 FAM103A1Q9BTL3 118 aaKnown RBP12.77□□□□□ -0.37
PRDM4-201ENST00000228437 HS3ST3B1Q9Y662 390 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 PLXNB3Q9ULL4 1909 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 TRBV11-1A0A0K0K1C0 115 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 SERPINE3A8MV23 424 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 TRAPPC6AO75865 159 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 GAPDHP04406 335 aaKnown RBP12.77□□□□□ -0.37
PRDM4-201ENST00000228437 SERPINA7P05543 415 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 MELTFP08582 738 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 PGA3P0DJD8 388 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 RNF133Q8WVZ7 376 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 SIRT7Q9NRC8 400 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 WNT16Q9UBV4 365 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 DKKL1Q9UK85 242 aa12.77□□□□□ -0.37
PRDM4-201ENST00000228437 TRAV34A0A0B4J273 112 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 METTL15P1P0C7V9 234 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 IL2RGP31785 369 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 APLNRP35414 380 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 RNF4P78317 190 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 TOMM20LQ6UXN7 152 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 TMEM18Q96B42 140 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 CCNL2Q96S94 520 aaPredicted RBP12.76□□□□□ -0.37
PRDM4-201ENST00000228437 RSG1Q9BU20 258 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 ELOVL1Q9BW60 279 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 ULBP2Q9BZM5 246 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 UCK1Q9HA47 277 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 PDGFBP01127 241 aaPredicted RBP12.76□□□□□ -0.37
PRDM4-201ENST00000228437 DLX2Q07687 328 aaPredicted RBP12.76□□□□□ -0.37
PRDM4-201ENST00000228437 HEPN1Q6WQI6 88 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 PTPMT1Q8WUK0 201 aaPredicted RBP12.76□□□□□ -0.37
PRDM4-201ENST00000228437 RNF166Q96A37 237 aaPredicted RBP12.76□□□□□ -0.37
PRDM4-201ENST00000228437 NTNG2Q96CW9 530 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 M0R135 149 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 EDN3P14138 238 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 FUT3P21217 361 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 PCP4P48539 62 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 FGF14Q92915 247 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 SPTSSAQ969W0 71 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 ELSPBP1Q96BH3 223 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 ZNF799Q96GE5 643 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 DDA1Q9BW61 102 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 PLEKHF2Q9H8W4 249 aa12.76□□□□□ -0.37
PRDM4-201ENST00000228437 SEBOXQ9HB31 216 aaPredicted RBP12.76□□□□□ -0.37
PRDM4-201ENST00000228437 IGHV5-51A0A0C4DH38 117 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 CHST1O43916 411 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 CTSDP07339 412 aaPredicted RBP12.75□□□□□ -0.37
PRDM4-201ENST00000228437 SELLP14151 372 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 IGFBP3P17936 291 aaPredicted RBP12.75□□□□□ -0.37
PRDM4-201ENST00000228437 GKN2Q86XP6 184 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 HIST1H2AAQ96QV6 131 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 ZNF320A2RRD8 509 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 WIPF3A6NGB9 483 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 TLCD2A6NGC4 264 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 TMEM14DPA8MWL7 114 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 UBE2G2P60604 165 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 FUT7Q11130 342 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 PIGYQ3MUY2 71 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 FAM166AQ6J272 317 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 ZNF845Q96IR2 970 aaPredicted RBP12.75□□□□□ -0.37
PRDM4-201ENST00000228437 LMAN1LQ9HAT1 526 aa12.75□□□□□ -0.37
PRDM4-201ENST00000228437 DNAJC13O75165 2243 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms