RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 RGS5O15539 181 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 CHRM2P08172 466 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 PPIAL4FP0DN26 164 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 PSG2P11465 335 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 ELK1P19419 428 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 CPT2P23786 658 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 LMO1P25800 156 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 GIFP27352 417 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 TNFSF8P32971 234 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 TMEM50BP56557 158 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 PIGYQ3MUY2 71 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 ATPAF1Q5TC12 328 aaPredicted RBP11.76□□□□□ -0.53
SEC61B-201ENST00000223641 STUMQ69YW2 141 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 SIGIRRQ6IA17 410 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 Q6P435 159 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 DNM1P46Q6ZS02 220 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 LRRC75A-AS1Q8N1F1 130 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 ANGPTL6Q8NI99 470 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 NICN1Q9BSH3 213 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 BARX1Q9HBU1 254 aaPredicted RBP11.76□□□□□ -0.53
SEC61B-201ENST00000223641 TMEM165Q9HC07 324 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 NLKQ9UBE8 527 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 ZNF222Q9UK12 451 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 PPIAL4AQ9Y536 164 aa11.76□□□□□ -0.53
SEC61B-201ENST00000223641 ABCA12Q86UK0 2595 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 IGKV1D-17A0A075B6S4 117 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 TRAV38-1A0A0B4J264 116 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 OR2AT4A6NND4 320 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 CLDN25C9JDP6 229 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 SCGNO76038 276 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 IGHV2-70P01814 119 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 AMY2BP19961 511 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 CD80P33681 288 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 ATP5J2P56134 94 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 TAF9Q16594 264 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 MICBQ29980 383 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 MOGAT2Q3SYC2 334 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 SFRP4Q6FHJ7 346 aaPredicted RBP11.75□□□□□ -0.53
SEC61B-201ENST00000223641 RAB12Q6IQ22 244 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 FIP1L1Q6UN15 594 aaKnown RBP11.75□□□□□ -0.53
SEC61B-201ENST00000223641 CCDC190Q86UF4 302 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 S100A16Q96FQ6 103 aaKnown RBP11.75□□□□□ -0.53
SEC61B-201ENST00000223641 LURAP1Q96LR2 239 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 GAL3ST1Q99999 423 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 SOSTQ9BQB4 213 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 RCC2Q9P258 522 aaKnown RBP11.75□□□□□ -0.53
SEC61B-201ENST00000223641 WIPI2Q9Y4P8 454 aa11.75□□□□□ -0.53
SEC61B-201ENST00000223641 HECTD1Q9ULT8 2610 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 PDZD2O15018 2839 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 RFPL4AA6NLU0 287 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 RFPL4AL1F8VTS6 287 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 SOCS1O15524 211 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 XRCC3O43542 346 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 SSX4O60224 188 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 TPPPO94811 219 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 ZNF205O95201 554 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 DNASE1P24855 282 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 DUSP1P28562 367 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 S100A5P33763 92 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 ETV6P41212 452 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 PITPNBP48739 271 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 VEGFCP49767 419 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 GMFBP60983 142 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 BTG1P62324 171 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 ZMYND11Q15326 602 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 DEFB113Q30KQ7 82 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 ZNF788Q6ZQV5 615 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 ZNF525Q8N782 197 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 BOLLQ8N9W6 283 aaKnown RBP11.74□□□□□ -0.53
SEC61B-201ENST00000223641 C19orf18Q8NEA5 215 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 OR56B1Q8NGI3 324 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 OR10R2Q8NGX6 335 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 SDSLQ96GA7 329 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 ATG5Q9H1Y0 275 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.74□□□□□ -0.53
SEC61B-201ENST00000223641 ZNF581Q9P0T4 197 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 DNAJB11Q9UBS4 358 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 ADAM30Q9UKF2 790 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 HSF4Q9ULV5 492 aa11.74□□□□□ -0.53
SEC61B-201ENST00000223641 IGHV3OR15-7A0A075B7D8 119 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 H3BUI4 141 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 SH2D1BO14796 132 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 NDUFA2O43678 99 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 ANKRD17O75179 2603 aaKnown RBP11.73□□□□□ -0.53
SEC61B-201ENST00000223641 OR2H2O95918 312 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 HAND1O96004 215 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 GLAP06280 429 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 GABRR1P24046 479 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 CDK2P24941 298 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 CHATP28329 748 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 PRDX2P32119 198 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 MNDAP41218 407 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 TMEM155Q4W5P6 130 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 PLAC9Q5JTB6 97 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 CNIH2Q6PI25 160 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 METAP1DQ6UB28 335 aaPredicted RBP11.73□□□□□ -0.53
SEC61B-201ENST00000223641 VPS13CQ709C8 3753 aa11.73□□□□□ -0.53
SEC61B-201ENST00000223641 PEG10Q86TG7 708 aaKnown RBP11.73□□□□□ -0.53
SEC61B-201ENST00000223641 CD177Q8N6Q3 437 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms