RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CHEK1O14757 476 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 CTAG2O75638 210 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 PLPPR5Q32ZL2 321 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 LFNGQ8NES3 379 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 PCGF1Q9BSM1 259 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 SRRQ9GZT4 340 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 COL11A1P12107 1806 aaPredicted RBP16.24■□□□□ 0.19
CLIP2-201ENST00000223398 CD80P33681 288 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 IGFBP7Q16270 282 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 OIT3Q8WWZ8 545 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 HSD17B10Q99714 261 aaKnown RBP16.24■□□□□ 0.19
CLIP2-201ENST00000223398 OR2J1Q9GZK6 312 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 MRPS11P82912 194 aaKnown RBP16.24■□□□□ 0.19
CLIP2-201ENST00000223398 CDCP2Q5VXM1 449 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 ZCCHC14Q8WYQ9 949 aaKnown RBP16.24■□□□□ 0.19
CLIP2-201ENST00000223398 FOXJ2Q9P0K8 574 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 CRYBB2P43320 205 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 GGTLC2Q14390 218 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 RXFP4Q8TDU9 374 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 HGDQ93099 445 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 SVILO95425 2214 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 DLEC1Q9Y238 1755 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 PRR19A6NJB7 356 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 GEMIN2O14893 280 aaKnown RBP16.24■□□□□ 0.19
CLIP2-201ENST00000223398 LALBAP00709 142 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 ZNF17P17021 662 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 AKR1C3P42330 323 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 CLEC12BQ2HXU8 276 aa16.24■□□□□ 0.19
CLIP2-201ENST00000223398 INO80CQ6PI98 192 aaPredicted RBP16.24■□□□□ 0.19
CLIP2-201ENST00000223398 FOCADQ5VW36 1801 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 ZNF727A8MUV8 499 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 PRF1P14222 555 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 FPR2P25090 351 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 LILRB4Q8NHJ6 448 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 WDR13Q9H1Z4 485 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 PILRAQ9UKJ1 303 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 DNASE2O00115 360 aaPredicted RBP16.23■□□□□ 0.19
CLIP2-201ENST00000223398 COA4Q9NYJ1 87 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 HS3ST3B1Q9Y662 390 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 SSBP1Q04837 148 aaKnown RBP16.23■□□□□ 0.19
CLIP2-201ENST00000223398 COL19A1Q14993 1142 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 C1QCP02747 245 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 ZNF90Q03938 601 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 SSX1Q16384 188 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 CLN8Q9UBY8 286 aa16.23■□□□□ 0.19
CLIP2-201ENST00000223398 ZNF320A2RRD8 509 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 BRS3P32247 399 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 KRTCAP3Q53RY4 240 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 DHRS9Q9BPW9 319 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 FRRS1LQ9P0K9 344 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 DOK5Q9P104 306 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 TAF1LQ8IZX4 1826 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 TDRD15B5MCY1 1934 aaKnown RBP16.22■□□□□ 0.19
CLIP2-201ENST00000223398 DCTN6O00399 190 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 MBP02144 154 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 CTF1Q16619 201 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 RPUSD3Q6P087 351 aaKnown RBP16.22■□□□□ 0.19
CLIP2-201ENST00000223398 Q6ZNX1 250 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 OR5AP2Q8NGF4 316 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 MED30Q96HR3 178 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 PECRQ9BY49 303 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 C3orf85A0A1B0GTC6 90 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 APELAP0DMC3 54 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 S100A4P26447 101 aaKnown RBP16.22■□□□□ 0.19
CLIP2-201ENST00000223398 ADAMTS17Q8TE56 1095 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 OR1A1Q9P1Q5 309 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 SLC31A2O15432 143 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 C1QBP02746 253 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 MAP6Q96JE9 813 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 CACNG5Q9UF02 275 aa16.22■□□□□ 0.19
CLIP2-201ENST00000223398 LTBRP36941 435 aa16.21■□□□□ 0.19
CLIP2-201ENST00000223398 GPR27Q9NS67 375 aa16.21■□□□□ 0.19
CLIP2-201ENST00000223398 POMT1Q9Y6A1 747 aa16.21■□□□□ 0.19
CLIP2-201ENST00000223398 SNRPGP15A8MWD9 76 aa16.21■□□□□ 0.19
CLIP2-201ENST00000223398 RBPMSQ93062 196 aaKnown RBP16.21■□□□□ 0.19
CLIP2-201ENST00000223398 ZNF665Q9H7R5 613 aa16.21■□□□□ 0.19
CLIP2-201ENST00000223398 GPR6P46095 362 aaPredicted RBP16.21■□□□□ 0.19
CLIP2-201ENST00000223398 ZNF770Q6IQ21 691 aaPredicted RBP16.21■□□□□ 0.19
CLIP2-201ENST00000223398 TMEM147Q9BVK8 224 aa16.21■□□□□ 0.19
CLIP2-201ENST00000223398 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.21■□□□□ 0.19
CLIP2-201ENST00000223398 CACFD1Q9UGQ2 172 aa16.21■□□□□ 0.19
CLIP2-201ENST00000223398 H7BYZ3 331 aa16.21■□□□□ 0.19
CLIP2-201ENST00000223398 K7ESF4 209 aa16.21■□□□□ 0.19
CLIP2-201ENST00000223398 FAM214BQ7L5A3 538 aa16.21■□□□□ 0.19
CLIP2-201ENST00000223398 PLSCR3Q9NRY6 295 aa16.21■□□□□ 0.19
CLIP2-201ENST00000223398 SLC35D1Q9NTN3 355 aa16.21■□□□□ 0.19
CLIP2-201ENST00000223398 UMAD1C9J7I0 102 aa16.21■□□□□ 0.18
CLIP2-201ENST00000223398 NRXN2Q9P2S2 1712 aa16.2■□□□□ 0.18
CLIP2-201ENST00000223398 PCM1Q15154 2024 aa16.2■□□□□ 0.18
CLIP2-201ENST00000223398 IGKV3-7A0A075B6H7 116 aa16.2■□□□□ 0.18
CLIP2-201ENST00000223398 ADRA2AP08913 450 aa16.2■□□□□ 0.18
CLIP2-201ENST00000223398 FGF2P09038 288 aa16.2■□□□□ 0.18
CLIP2-201ENST00000223398 BMI1P35226 326 aa16.2■□□□□ 0.18
CLIP2-201ENST00000223398 H3F3CQ6NXT2 135 aa16.2■□□□□ 0.18
CLIP2-201ENST00000223398 SEBOXQ9HB31 216 aaPredicted RBP16.2■□□□□ 0.18
CLIP2-201ENST00000223398 XIRP1Q702N8 1843 aaKnown RBP16.2■□□□□ 0.18
CLIP2-201ENST00000223398 ZDBF2Q9HCK1 2354 aa16.2■□□□□ 0.18
CLIP2-201ENST00000223398 LOC101059948A0A1B0GTJ6 334 aa16.2■□□□□ 0.18
CLIP2-201ENST00000223398 C20orf202A1L168 122 aa16.2■□□□□ 0.18
CLIP2-201ENST00000223398 FGF9P31371 208 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms