RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 ARSBP15848 533 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 SLC25A16P16260 332 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 NR4A2P43354 598 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 DGUOKQ16854 277 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 MICBQ29980 383 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 CHRFAM7AQ494W8 412 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 IDNKQ5T6J7 187 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 TEX36Q5VZQ5 186 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 OR10K2Q6IF99 312 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 LRRC28Q86X40 367 aaPredicted RBP13.71□□□□□ -0.21
LIM2-201ENST00000221973 OR51D1Q8NGF3 324 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 FAM3DQ96BQ1 224 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 BANF2Q9H503 90 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 TMEM165Q9HC07 324 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 HMG20AQ9NP66 347 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 IL36GQ9NZH8 169 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 NDUFA13Q9P0J0 144 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 NLKQ9UBE8 527 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 GHRLQ9UBU3 117 aa13.71□□□□□ -0.21
LIM2-201ENST00000221973 ANK2Q01484 3957 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 VWC2LB2RUY7 222 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 ZNF780AO75290 641 aaPredicted RBP13.7□□□□□ -0.22
LIM2-201ENST00000221973 CRTAPO75718 401 aaPredicted RBP13.7□□□□□ -0.22
LIM2-201ENST00000221973 BPNT1O95861 308 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 TFF1P04155 84 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 IGHV4-31P0DP07 118 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 MUC1P15941 1255 aaPredicted RBP13.7□□□□□ -0.22
LIM2-201ENST00000221973 CFPP27918 469 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 DUSP1P28562 367 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 MDH2P40926 338 aaKnown RBP13.7□□□□□ -0.22
LIM2-201ENST00000221973 FGF12P61328 243 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 GPR176Q14439 515 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 C2orf76Q3KRA6 126 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 ZNF404Q494X3 552 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 ELP2Q6IA86 826 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 FAM90A1Q86YD7 464 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 FAM46BQ96A09 425 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 SLC25A46Q96AG3 418 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 GAL3ST1Q99999 423 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 TMEM246Q9BRR3 403 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 BARHL1Q9BZE3 327 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 LIN7BQ9HAP6 207 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 RHOFQ9HBH0 211 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 PCDHB16Q9NRJ7 776 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 OR14J1Q9UGF5 321 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 DYSFO75923 2080 aa13.7□□□□□ -0.22
LIM2-201ENST00000221973 RFPL4AA6NLU0 287 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 OR2AT4A6NND4 320 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 RNF212BA8MTL3 300 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 RFPL4AL1F8VTS6 287 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 MPIG6BO95866 241 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 KNG1P01042 644 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 IFNA2P01563 188 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 FAM157CP0CG43 387 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 VSIG8P0DPA2 414 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 PSG2P11465 335 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 GTF2F2P13984 249 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 GABRA2P47869 451 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 CEBPDP49716 269 aaPredicted RBP13.69□□□□□ -0.22
LIM2-201ENST00000221973 RORCP51449 518 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 PIGYQ3MUY2 71 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 FOXB2Q5VYV0 432 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 STUMQ69YW2 141 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 FIP1L1Q6UN15 594 aaKnown RBP13.69□□□□□ -0.22
LIM2-201ENST00000221973 CROCCP3Q8IVE0 287 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 OSR2Q8N2R0 312 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 MUC20Q8N307 709 aaPredicted RBP13.69□□□□□ -0.22
LIM2-201ENST00000221973 TMEM104Q8NE00 496 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 CST11Q9H112 138 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 TMEM160Q9NX00 188 aa13.69□□□□□ -0.22
LIM2-201ENST00000221973 IGKV1D-17A0A075B6S4 117 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 ZNF701M0R085 212 aaPredicted RBP13.68□□□□□ -0.22
LIM2-201ENST00000221973 FSTL3O95633 263 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 PAHP00439 452 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 SNRPBP14678 240 aaKnown RBP13.68□□□□□ -0.22
LIM2-201ENST00000221973 MGMTP16455 207 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 USF1P22415 310 aaPredicted RBP13.68□□□□□ -0.22
LIM2-201ENST00000221973 RANBP1P43487 201 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 BMXP51813 675 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 UNC119Q13432 240 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 PDCD1Q15116 288 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 KCNJ8Q15842 424 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 TMEM155Q4W5P6 130 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 METAP1DQ6UB28 335 aaPredicted RBP13.68□□□□□ -0.22
LIM2-201ENST00000221973 LYPD2Q6UXB3 125 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 SPICQ8N5J4 248 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 Q8NFD4 153 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 ANGPTL6Q8NI99 470 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 KCNG3Q8TAE7 436 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 DGCR14Q96DF8 476 aaKnown RBP13.68□□□□□ -0.22
LIM2-201ENST00000221973 CCL13Q99616 98 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 SELENOIQ9C0D9 397 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 OR5V1Q9UGF6 321 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 CDC42EP3Q9UKI2 254 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 ST3GAL6Q9Y274 331 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 TANC2Q9HCD6 1990 aa13.68□□□□□ -0.22
LIM2-201ENST00000221973 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.67□□□□□ -0.22
LIM2-201ENST00000221973 IGHV4-61A0A0C4DH41 118 aa13.67□□□□□ -0.22
LIM2-201ENST00000221973 TMEM272A0A1B0GTI8 110 aa13.67□□□□□ -0.22
LIM2-201ENST00000221973 A6NHS1 94 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms