RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 COL19A1Q14993 1142 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 ETFDHQ16134 617 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 LRRTM1Q86UE6 522 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 OR2M3Q8NG83 312 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 OR5R1Q8NH85 324 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 TTTY12Q9BZ98 90 aa16.74■□□□□ 0.27
SMPD3-201ENST00000219334 RFPL4AA6NLU0 287 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 RFPL4AL1F8VTS6 287 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 PRSS12P56730 875 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 ERVFC1-1P60608 527 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 SSX7Q7RTT5 188 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 CADM3Q8N126 398 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 NHLRC2Q8NBF2 726 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 SRRQ9GZT4 340 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 SHROOM3Q8TF72 1996 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 GZMHP20718 246 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 DEFA6Q01524 100 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 TMEM231Q9H6L2 316 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 HAND1O96004 215 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 ACSM4P0C7M7 580 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 OXA1LQ15070 435 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 HIKESHIQ53FT3 197 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 FAM219BQ5XKK7 198 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 OR2H1Q9GZK4 316 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 CNTD2Q9H8S5 307 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 CACNG5Q9UF02 275 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 YTHDF2Q9Y5A9 579 aaKnown RBP16.73■□□□□ 0.27
SMPD3-201ENST00000219334 CDK5RAP2Q96SN8 1893 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 SPTA1P02549 2419 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 COL18A1P39060 1754 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 TGOLN2O43493 480 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 OPN1MWP04001 364 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 OPN1MW2P0DN77 364 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 OPN1MW3P0DN78 364 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 FFAR4Q5NUL3 377 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 OR1A1Q9P1Q5 309 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 OOEPA6NGQ2 149 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 GPR6P46095 362 aaPredicted RBP16.73■□□□□ 0.27
SMPD3-201ENST00000219334 C21orf58P58505 322 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 ZNF770Q6IQ21 691 aaPredicted RBP16.73■□□□□ 0.27
SMPD3-201ENST00000219334 NTNG2Q96CW9 530 aa16.73■□□□□ 0.27
SMPD3-201ENST00000219334 CDC42EP2O14613 210 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 SPNS3Q6ZMD2 512 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 NKX6-2Q9C056 277 aaPredicted RBP16.72■□□□□ 0.27
SMPD3-201ENST00000219334 ZNF205O95201 554 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 CD96P40200 585 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 SIGLECL1Q8N7X8 197 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 C10orf35Q96D05 121 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 ZNF385DQ9H6B1 395 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 ZNF716A6NP11 495 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 LRRC3BQ96PB8 259 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 STRCQ7RTU9 1775 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 BCL2L11O43521 198 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 IGHA1P01876 353 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 IGHA2P01877 340 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 WNT1P04628 370 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 TGIF2LYQ8IUE0 185 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 TGIF2LXQ8IUE1 241 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 UCN2Q96RP3 112 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 ZNF586Q9NXT0 402 aa16.72■□□□□ 0.27
SMPD3-201ENST00000219334 SEMA7AO75326 666 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 PJVKQ0ZLH3 352 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 CLEC2AQ6UVW9 174 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 RELL2Q8NC24 303 aaPredicted RBP16.71■□□□□ 0.27
SMPD3-201ENST00000219334 SLC25A40Q8TBP6 338 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 LPAR2Q9HBW0 351 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 HRKO00198 91 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 LSMEM1Q8N8F7 131 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 TMUB1Q9BVT8 246 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 CES1P1Q9UKY3 287 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 LYZP61626 148 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 NAA60Q9H7X0 242 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 FLRT3Q9NZU0 649 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 MTFP1Q9UDX5 166 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 INSIG2Q9Y5U4 225 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 CTAG2O75638 210 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 BAK1Q16611 211 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 MESTQ5EB52 335 aa16.71■□□□□ 0.27
SMPD3-201ENST00000219334 ZNF501Q96CX3 271 aaPredicted RBP16.71■□□□□ 0.27
SMPD3-201ENST00000219334 FAM103A1Q9BTL3 118 aaKnown RBP16.71■□□□□ 0.27
SMPD3-201ENST00000219334 SLC16A12Q6ZSM3 486 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 C10orf90Q96M02 699 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 SLC25A22Q9H936 323 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 ZMIZ1Q9ULJ6 1067 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 A0A1W2PPQ1 181 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 A0A1W2PPV9 198 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 J3QT63 122 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 SFT2D2O95562 160 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 NUDT16L1Q9BRJ7 211 aaKnown RBP16.7■□□□□ 0.26
SMPD3-201ENST00000219334 GPR27Q9NS67 375 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 MRPL22Q9NWU5 206 aaKnown RBP16.7■□□□□ 0.26
SMPD3-201ENST00000219334 NAGKQ9UJ70 344 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 NPTNQ9Y639 398 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 LAMA4Q16363 1823 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 ZBTB37Q5TC79 503 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 DDA1Q9BW61 102 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 TMEM38BQ9NVV0 291 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 C4orf17Q53FE4 359 aa16.7■□□□□ 0.26
SMPD3-201ENST00000219334 DHRS7BQ6IAN0 325 aaPredicted RBP16.7■□□□□ 0.26
SMPD3-201ENST00000219334 C9orf40Q8IXQ3 194 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms