RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 YKT6O15498 198 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 C1QL1O75973 258 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 PTAFRP25105 342 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 NHLH2Q02577 135 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 AWAT1Q58HT5 328 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 OR1F12Q8NHA8 337 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 AKR7LQ8NHP1 331 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 GINS3Q9BRX5 216 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 SCRT1Q9BWW7 348 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 SUCNR1Q9BXA5 334 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 EGLN1Q9GZT9 426 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 LUZP4Q9P127 313 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 CCDC187A0A096LP49 1063 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 MED19A0JLT2 244 aaPredicted RBP14.97□□□□□ -0.01
USB1-201ENST00000219281 C1orf196B1AJZ1 125 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 TERTO14746 1132 aaKnown RBP14.97□□□□□ -0.01
USB1-201ENST00000219281 NRASP01111 189 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 CCL4P13236 92 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 P2RY1P47900 373 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 TRIM61Q5EBN2 209 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 FBXW12Q6X9E4 464 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 LHFPL2Q6ZUX7 228 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 FBXL14Q8N1E6 418 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 MSI2Q96DH6 328 aaKnown RBP14.97□□□□□ -0.01
USB1-201ENST00000219281 C20orf24Q9BUV8 137 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 SPACA1Q9HBV2 294 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 CRLF2Q9HC73 371 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 C19orf12Q9NSK7 152 aa14.97□□□□□ -0.01
USB1-201ENST00000219281 FBXO9Q9UK97 447 aaPredicted RBP14.97□□□□□ -0.01
USB1-201ENST00000219281 LOC102723996A0A087X1L8 192 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 PHF1O43189 567 aaPredicted RBP14.96□□□□□ -0.01
USB1-201ENST00000219281 PRH1P02810 166 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 PAX6P26367 422 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 DUSP1P28562 367 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 NTF4P34130 210 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 NOVA1P51513 510 aaKnown RBP14.96□□□□□ -0.01
USB1-201ENST00000219281 SSR4P51571 173 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 GPR157Q5UAW9 335 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 CDCP2Q5VXM1 449 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 ASCL4Q6XD76 172 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 OSR2Q8N2R0 312 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 LRTM2Q8N967 370 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 IP6K3Q96PC2 410 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 BCO1Q9HAY6 547 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 ST3GAL6Q9Y274 331 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 RCL1Q9Y2P8 373 aaKnown RBP14.96□□□□□ -0.01
USB1-201ENST00000219281 C7orf77A4D0Y5 90 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 M0R036 132 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 UMODP07911 640 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 DAOP14920 347 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 ZNF32P17041 273 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 B2MP61769 119 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 RAC1P63000 192 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 ZFP36L1Q07352 338 aaKnown RBP14.96□□□□□ -0.01
USB1-201ENST00000219281 IL11RAQ14626 422 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 TGIF1Q15583 401 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 LGI3Q8N145 548 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 GPR137CQ8N3F9 429 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 COMMD1Q8N668 190 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 HSD17B11Q8NBQ5 300 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 ISOC2Q96AB3 205 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 IMMP1LQ96LU5 166 aa14.96□□□□□ -0.01
USB1-201ENST00000219281 PTRH2Q9Y3E5 179 aaKnown RBP14.96□□□□□ -0.01
USB1-201ENST00000219281 COX6A1P12074 109 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 B4GALT1P15291 398 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 ASCL1P50553 236 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 UCP2P55851 309 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 IL13RA2Q14627 380 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 HPSE2Q8WWQ2 592 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 SMOC1Q9H4F8 434 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 WDR54Q9H977 334 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 ZNF286AQ9HBT8 521 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 NSG1A0A0A6YYJ2 146 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 A0A1B0GV50 99 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 ACAA1P09110 424 aaPredicted RBP14.95□□□□□ -0.02
USB1-201ENST00000219281 CST2P09228 141 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 ZNF44P15621 663 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 CBR1P16152 277 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 HTR5AP47898 357 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.95□□□□□ -0.02
USB1-201ENST00000219281 BATF2Q8N1L9 274 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 SYT3Q9BQG1 590 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 ATPIF1Q9UII2 106 aa14.95□□□□□ -0.02
USB1-201ENST00000219281 ST8SIA3O43173 380 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 AADACP22760 399 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 KRBOX4Q5JUW0 171 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 MEX3BQ6ZN04 569 aaKnown RBP14.94□□□□□ -0.02
USB1-201ENST00000219281 Q6ZPA2 131 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 MR1Q95460 341 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 MOB3AQ96BX8 217 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 ALKBH3Q96Q83 286 aaPredicted RBP14.94□□□□□ -0.02
USB1-201ENST00000219281 ZNF700Q9H0M5 742 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 TMEM38BQ9NVV0 291 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 CYC1P08574 325 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 ZNF468Q5VIY5 522 aaPredicted RBP14.94□□□□□ -0.02
USB1-201ENST00000219281 TMEM42Q69YG0 159 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 SLC23A3Q6PIS1 610 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 YRDCQ86U90 279 aaKnown RBP14.94□□□□□ -0.02
USB1-201ENST00000219281 SLC35G3Q8N808 338 aa14.94□□□□□ -0.02
USB1-201ENST00000219281 PIGCQ92535 297 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms