RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 H2BFSP57053 126 aa14.89□□□□□ -0.03
VRK1-201ENST00000216639 ZNF324BQ6AW86 544 aaPredicted RBP14.89□□□□□ -0.03
VRK1-201ENST00000216639 ADAD2Q8NCV1 583 aaKnown RBP14.89□□□□□ -0.03
VRK1-201ENST00000216639 MITD1Q8WV92 249 aa14.89□□□□□ -0.03
VRK1-201ENST00000216639 OR51I2Q9H344 312 aa14.89□□□□□ -0.03
VRK1-201ENST00000216639 FN3KRPQ9HA64 309 aa14.89□□□□□ -0.03
VRK1-201ENST00000216639 SYNGR1O43759 233 aa14.88□□□□□ -0.03
VRK1-201ENST00000216639 SIX6O95475 246 aa14.88□□□□□ -0.03
VRK1-201ENST00000216639 DUS4LO95620 317 aaKnown RBP14.88□□□□□ -0.03
VRK1-201ENST00000216639 CECR9P0C854 216 aa14.88□□□□□ -0.03
VRK1-201ENST00000216639 GMFBP60983 142 aa14.88□□□□□ -0.03
VRK1-201ENST00000216639 PDCD1Q15116 288 aa14.88□□□□□ -0.03
VRK1-201ENST00000216639 C2orf68Q2NKX9 166 aa14.88□□□□□ -0.03
VRK1-201ENST00000216639 AADACL3Q5VUY0 350 aa14.88□□□□□ -0.03
VRK1-201ENST00000216639 BRICD5Q6PL45 260 aa14.88□□□□□ -0.03
VRK1-201ENST00000216639 BATF2Q8N1L9 274 aa14.88□□□□□ -0.03
VRK1-201ENST00000216639 ADAT1Q9BUB4 502 aaKnown RBP14.88□□□□□ -0.03
VRK1-201ENST00000216639 TMPRSS13Q9BYE2 586 aa14.88□□□□□ -0.03
VRK1-201ENST00000216639 POLDIP2Q9Y2S7 368 aa14.88□□□□□ -0.03
VRK1-201ENST00000216639 IGKV1D-8A0A087WSZ0 117 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 G3V3Q6 166 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 PRRG2O14669 202 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 OR5H8P0DN80 308 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 PRKACAP17612 351 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 CEACAM8P31997 349 aaPredicted RBP14.87□□□□□ -0.03
VRK1-201ENST00000216639 OPRM1P35372 400 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 ERVS71-1P61550 626 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 PSG7Q13046 419 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 Q8IYB0 196 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 OR5M8Q8NGP6 311 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 KLF14Q8TD94 323 aaPredicted RBP14.87□□□□□ -0.03
VRK1-201ENST00000216639 EXTL1Q92935 676 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 MARS2Q96GW9 593 aaKnown RBP14.87□□□□□ -0.03
VRK1-201ENST00000216639 ZNF2Q9BSG1 426 aaPredicted RBP14.87□□□□□ -0.03
VRK1-201ENST00000216639 C5orf66Q9H5L9 145 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 CHMP1AQ9HD42 196 aaPredicted RBP14.87□□□□□ -0.03
VRK1-201ENST00000216639 C14orf166Q9Y224 244 aaKnown RBP14.87□□□□□ -0.03
VRK1-201ENST00000216639 CELSR3Q9NYQ7 3312 aa14.87□□□□□ -0.03
VRK1-201ENST00000216639 CEP250Q9BV73 2442 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.86□□□□□ -0.03
VRK1-201ENST00000216639 MCRIP1C9JLW8 97 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 PGAM2P15259 253 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 HLA-GP17693 338 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 CALCRP30988 508 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 UCNP55089 124 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 TMPRSS3P57727 454 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 DHODHQ02127 395 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 IKZF1Q13422 519 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 IL13RA2Q14627 380 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 OR8G1Q15617 311 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 TIMM23BQ5SRD1 257 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 FAM58AQ8N1B3 248 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 CASTOR1Q8WTX7 329 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 DYRK2Q92630 601 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 CLEC4MQ9H2X3 399 aaPredicted RBP14.86□□□□□ -0.03
VRK1-201ENST00000216639 TMEM100Q9NV29 134 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 RCC2Q9P258 522 aaKnown RBP14.86□□□□□ -0.03
VRK1-201ENST00000216639 SLC25A15Q9Y619 301 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 IGHV1-18A0A0C4DH31 117 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 OR5H14A6NHG9 310 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 TMEM210A6NLX4 147 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 F8VVB4 439 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 F8VWA3 439 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 TSC22D2O75157 780 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 GCH1P30793 250 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 ZNF81P51508 661 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 FGL1Q08830 312 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 ZNF718Q3SXZ3 478 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 LGALSLQ3ZCW2 172 aaPredicted RBP14.86□□□□□ -0.03
VRK1-201ENST00000216639 FAM76BQ5HYJ3 339 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 C1QTNF12Q5T7M4 302 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 DCAF12L2Q5VW00 463 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 SLC22A25Q6T423 547 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 ZNF767PQ75MW2 155 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 RPRMLQ8N4K4 120 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 DHRS9Q9BPW9 319 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 PDCD10Q9BUL8 212 aa14.86□□□□□ -0.03
VRK1-201ENST00000216639 CACNA1GO43497 2377 aa14.85□□□□□ -0.03
VRK1-201ENST00000216639 FAM221AA4D161 298 aa14.85□□□□□ -0.03
VRK1-201ENST00000216639 MSTNO14793 375 aa14.85□□□□□ -0.03
VRK1-201ENST00000216639 SFT2D2O95562 160 aa14.85□□□□□ -0.03
VRK1-201ENST00000216639 PPP3CBP16298 524 aa14.85□□□□□ -0.03
VRK1-201ENST00000216639 SRSF7Q16629 238 aaKnown RBP eCLIP14.85□□□□□ -0.03
VRK1-201ENST00000216639 ZNF474Q6S9Z5 364 aaPredicted RBP14.85□□□□□ -0.03
VRK1-201ENST00000216639 C3P1Q6ZMU1 363 aa14.85□□□□□ -0.03
VRK1-201ENST00000216639 CISD2Q8N5K1 135 aaKnown RBP14.85□□□□□ -0.03
VRK1-201ENST00000216639 OR8G5Q8NG78 346 aa14.85□□□□□ -0.03
VRK1-201ENST00000216639 COQ8AQ8NI60 647 aa14.85□□□□□ -0.03
VRK1-201ENST00000216639 NEK7Q8TDX7 302 aa14.85□□□□□ -0.03
VRK1-201ENST00000216639 MUCL1Q96DR8 90 aa14.85□□□□□ -0.03
VRK1-201ENST00000216639 RTBDNQ9BSG5 229 aaPredicted RBP14.85□□□□□ -0.03
VRK1-201ENST00000216639 RIMS4Q9H426 269 aaPredicted RBP14.85□□□□□ -0.03
VRK1-201ENST00000216639 PURGQ9UJV8 347 aaKnown RBP14.85□□□□□ -0.03
VRK1-201ENST00000216639 IGHV2OR16-5A0A0B4J2B6 119 aa14.84□□□□□ -0.03
VRK1-201ENST00000216639 PLSCR5A0PG75 271 aa14.84□□□□□ -0.03
VRK1-201ENST00000216639 GLAP06280 429 aa14.84□□□□□ -0.03
VRK1-201ENST00000216639 GLI4P10075 376 aa14.84□□□□□ -0.03
VRK1-201ENST00000216639 NFYAP23511 347 aaPredicted RBP14.84□□□□□ -0.03
VRK1-201ENST00000216639 MPV17P39210 176 aa14.84□□□□□ -0.03
VRK1-201ENST00000216639 GLP1RP43220 463 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms