RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 ATP6V1E1P36543 226 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 RIDAP52758 137 aaKnown RBP12.23□□□□□ -0.45
UPK3A-201ENST00000216211 ROM1Q03395 351 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 EGR3Q06889 387 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 DOC2BQ14184 412 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 ZNF829Q3KNS6 432 aaPredicted RBP12.23□□□□□ -0.45
UPK3A-201ENST00000216211 SLC35E4Q6ICL7 350 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 ACP7Q6ZNF0 438 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 MKXQ8IYA7 352 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 ACBD7Q8N6N7 88 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 CD177Q8N6Q3 437 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 ZNF485Q8NCK3 441 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 BEND2Q8NDZ0 799 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 OR52N1Q8NH53 320 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 OR5R1Q8NH85 324 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 ASB17Q8WXJ9 295 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 SDSLQ96GA7 329 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 C19orf12Q9NSK7 152 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 ERVK13-1Q9NX77 482 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 RASL12Q9NYN1 266 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 NUFIP1Q9UHK0 495 aaKnown RBP12.23□□□□□ -0.45
UPK3A-201ENST00000216211 GTF2A1LQ9UNN4 478 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 TMEM14AQ9Y6G1 99 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 DSCAML1Q8TD84 2053 aa12.23□□□□□ -0.45
UPK3A-201ENST00000216211 TRBV23-1A0A0A0MS06 115 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 RFPL4AA6NLU0 287 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 RFPL4AL1F8VTS6 287 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 CCRL2O00421 344 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 MAGEB4O15481 346 aaPredicted RBP12.22□□□□□ -0.45
UPK3A-201ENST00000216211 SYNGR1O43759 233 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 SRSF10O75494 262 aaKnown RBP12.22□□□□□ -0.45
UPK3A-201ENST00000216211 MTRF1O75570 445 aaKnown RBP12.22□□□□□ -0.45
UPK3A-201ENST00000216211 DHRS3O75911 302 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 APOL3O95236 402 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 TTRP02766 147 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 HSMCR30P0CW71 290 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 GADD45AP24522 165 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 PAX6P26367 422 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 CEBPDP49716 269 aaPredicted RBP12.22□□□□□ -0.45
UPK3A-201ENST00000216211 LY6EQ16553 131 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 ZNF684Q5T5D7 378 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 ZBTB37Q5TC79 503 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 BATF2Q8N1L9 274 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 POC1AQ8NBT0 407 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 OR51G2Q8NGK0 314 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 OR5D13Q8NGL4 314 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 FAM110DQ8TAY7 271 aaPredicted RBP12.22□□□□□ -0.45
UPK3A-201ENST00000216211 CNN2Q99439 309 aaKnown RBP12.22□□□□□ -0.45
UPK3A-201ENST00000216211 SSX3Q99909 188 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 ADGRL4Q9HBW9 690 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 GPR173Q9NS66 373 aa12.22□□□□□ -0.45
UPK3A-201ENST00000216211 SF3B6Q9Y3B4 125 aaKnown RBP12.22□□□□□ -0.45
UPK3A-201ENST00000216211 AIREO43918 545 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 CPEP16870 476 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 HAAOP46952 286 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 TPBGQ13641 420 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 SPCS2Q15005 226 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 SSX1Q16384 188 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 SMIM21Q3B7S5 101 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 TIMM50Q3ZCQ8 353 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 PLEKHG7Q6ZR37 379 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 LHFPL3Q86UP9 236 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 OR4M1Q8NGD0 313 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 ITFG2Q969R8 447 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 AJUBAQ96IF1 538 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 SIGLEC9Q9Y336 463 aa12.21□□□□□ -0.45
UPK3A-201ENST00000216211 A6NIN4 97 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 LOC110117498-PIK3R3F6TDL0 507 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 J3QT63 122 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 PGA5P0DJD9 388 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 PRDX2P32119 198 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 BMXP51813 675 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 ERVFRD-1P60508 538 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 RPL31P62899 125 aaKnown RBP12.2□□□□□ -0.46
UPK3A-201ENST00000216211 ACTC1P68032 377 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 ACTA1P68133 377 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 GALEQ14376 348 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 LRRC75BQ2VPJ9 315 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 CLVS2Q5SYC1 327 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 BCL2L15Q5TBC7 163 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 OR2G6Q5TZ20 316 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 ZNF322Q6U7Q0 402 aaPredicted RBP12.2□□□□□ -0.46
UPK3A-201ENST00000216211 TMPRSS11AQ6ZMR5 421 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 C1QL4Q86Z23 238 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 SLC35F2Q8IXU6 374 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 ZNF561Q8N587 486 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 PPP1R35Q8TAP8 253 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 DCUN1D5Q9BTE7 237 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 MEGF9Q9H1U4 602 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 MOB1AQ9H8S9 216 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 NDUFB11Q9NX14 153 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 FBLN5Q9UBX5 448 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 OR14J1Q9UGF5 321 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 OR52A1Q9UKL2 312 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 R4GMQ9 66 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 V9GYS6 101 aa12.2□□□□□ -0.46
UPK3A-201ENST00000216211 A0A1B0GTI1 187 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 DAPL1A0PJW8 107 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 PQLC2LA1A4F0 135 aa12.19□□□□□ -0.46
UPK3A-201ENST00000216211 NXPH2O95156 264 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms