RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 MMP16P51512 607 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 SLC25A26Q70HW3 274 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 OR10AD1Q8NGE0 317 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 LINC00615Q96LM1 132 aaPredicted RBP9.29□□□□□ -0.92
VCL-201ENST00000211998 CNTD2Q9H8S5 307 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 PLCH1Q4KWH8 1693 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 HLA-GP17693 338 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 BRS3P32247 399 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 AESQ08117 197 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 RUNX2Q13950 521 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 KHDC3LQ587J8 217 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 Q6ZNB5 142 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 OR11G2Q8NGC1 345 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 HSPB8Q9UJY1 196 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 NINQ8N4C6 2090 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 LAMA4Q16363 1823 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 TOGARAM1Q9Y4F4 1720 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 DNASE2O00115 360 aaPredicted RBP9.29□□□□□ -0.92
VCL-201ENST00000211998 ZBTB25P24278 435 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 PSMB2P49721 201 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 SLC25A1P53007 311 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 EWSR1Q01844 656 aaKnown RBP eCLIP9.29□□□□□ -0.92
VCL-201ENST00000211998 ATRAIDQ6UW56 229 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 MTURNQ8N3F0 131 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 SPEM1Q8N4L4 309 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 WDR61Q9GZS3 305 aaKnown RBP9.29□□□□□ -0.92
VCL-201ENST00000211998 PDE4DIPQ5VU43 2346 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 IGHV3-20A0A0C4DH32 117 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 TRBV5-4A0A0C4DH59 114 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 H0Y8X5 98 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 SPNS3Q6ZMD2 512 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 RPS4Y2Q8TD47 263 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 MRPL24Q96A35 216 aaKnown RBP9.29□□□□□ -0.92
VCL-201ENST00000211998 LRRC3BQ96PB8 259 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 AURKAIP1Q9NWT8 199 aaPredicted RBP9.29□□□□□ -0.92
VCL-201ENST00000211998 ANKRD10Q9NXR5 420 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 ZMIZ1Q9ULJ6 1067 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 OR51B4Q9Y5P0 310 aa9.29□□□□□ -0.92
VCL-201ENST00000211998 CDC14BO60729 498 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 CTSDP07339 412 aaPredicted RBP9.28□□□□□ -0.92
VCL-201ENST00000211998 KLK2P20151 261 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 C6orf201Q7Z4U5 140 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 ACY3Q96HD9 319 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 GPX7Q96SL4 187 aaPredicted RBP9.28□□□□□ -0.92
VCL-201ENST00000211998 LRFN3Q9BTN0 628 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 DNAJC4Q9NNZ3 241 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 CACNG5Q9UF02 275 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 OR5B21A6NL26 309 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 FABP2P12104 132 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 CTAG1AP78358 180 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 FAM53BQ14153 422 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 CISD2Q8N5K1 135 aaKnown RBP9.28□□□□□ -0.92
VCL-201ENST00000211998 MRGPRX1Q96LB2 322 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 VSIG4Q9Y279 399 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 TRPM3Q9HCF6 1732 aaPredicted RBP9.28□□□□□ -0.92
VCL-201ENST00000211998 HELTA6NFD8 242 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 SH2D1BO14796 132 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 CA2P00918 260 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 PNLIPRP2P54317 469 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 C12orf54Q6X4T0 127 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 THSD4Q6ZMP0 1018 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 C20orf196Q8IYI0 205 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 SLC22A20A6NK97 555 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 A8MXK9 166 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 IL2RAP01589 272 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 THBS4P35443 961 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 SHBQ15464 509 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 TGIF1Q15583 401 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 TSPO2Q5TGU0 170 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 CARFQ8N187 725 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 ROBO4Q8WZ75 1007 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 MRGPRX4Q96LA9 322 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 PCGF1Q9BSM1 259 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 MENTQ9BUN1 341 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 PROCRQ9UNN8 238 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 CDC42EP2O14613 210 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 PAGE4O60829 102 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 APCSP02743 223 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 TMIGD3P0DMS9 266 aaPredicted RBP9.28□□□□□ -0.92
VCL-201ENST00000211998 ST6GAL1P15907 406 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 SUMO3P55854 103 aaPredicted RBP9.28□□□□□ -0.92
VCL-201ENST00000211998 PDCD1Q15116 288 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 JMJD6Q6NYC1 403 aaPredicted RBP9.28□□□□□ -0.92
VCL-201ENST00000211998 RNF165Q6ZSG1 346 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 FBXL14Q8N1E6 418 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 SLC45A2Q9UMX9 530 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 LOXL2Q9Y4K0 774 aa9.28□□□□□ -0.92
VCL-201ENST00000211998 A0A1W2PR80 420 aa9.27□□□□□ -0.92
VCL-201ENST00000211998 FUT3P21217 361 aa9.27□□□□□ -0.92
VCL-201ENST00000211998 ATP6V0CP27449 155 aa9.27□□□□□ -0.92
VCL-201ENST00000211998 LAMTOR1Q6IAA8 161 aa9.27□□□□□ -0.92
VCL-201ENST00000211998 ZNF343Q6P1L6 599 aa9.27□□□□□ -0.92
VCL-201ENST00000211998 GLRX5Q86SX6 157 aa9.27□□□□□ -0.92
VCL-201ENST00000211998 YRDCQ86U90 279 aaKnown RBP9.27□□□□□ -0.92
VCL-201ENST00000211998 SCCPDHQ8NBX0 429 aa9.27□□□□□ -0.92
VCL-201ENST00000211998 OR4A4PQ8NGN8 299 aa9.27□□□□□ -0.92
VCL-201ENST00000211998 MRPL30Q8TCC3 161 aaKnown RBP9.27□□□□□ -0.92
VCL-201ENST00000211998 OXGR1Q96P68 337 aa9.27□□□□□ -0.92
VCL-201ENST00000211998 KIAA1456Q9P272 454 aa9.27□□□□□ -0.92
VCL-201ENST00000211998 ZDHHC8Q9ULC8 765 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms