RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 MTCH1Q9NZJ7 389 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 PURGQ9UJV8 347 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 FZR1Q9UM11 496 aa16.79■□□□□ 0.28
TNFRSF1A-201ENST00000162749 GIPP09681 153 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 FABP6P51161 128 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ZNF81P51508 661 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ZNF573Q86YE8 665 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 MUC20Q8N307 709 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ADAT1Q9BUB4 502 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 PCDHB16Q9NRJ7 776 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 F8VVB4 439 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 F8VWA3 439 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 SYNGR1O43759 233 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 MPC2O95563 127 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 CD74P04233 296 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 BCL3P20749 454 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 KITLGP21583 273 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 UBE2MP61081 183 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 DAZAP2Q15038 168 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ZNF718Q3SXZ3 478 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 FAM76BQ5HYJ3 339 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 MBNL2Q5VZF2 373 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 WDR86Q86TI4 376 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ZNF680Q8NEM1 530 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 USB1Q9BQ65 265 aaKnown RBP16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 RTL8AQ9BWD3 113 aa16.78■□□□□ 0.28
TNFRSF1A-201ENST00000162749 SERPINE3A8MV23 424 aa16.77■□□□□ 0.28
TNFRSF1A-201ENST00000162749 ZNF736B4DX44 427 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-201ENST00000162749 RBM11P57052 281 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-201ENST00000162749 NKAPLQ5M9Q1 402 aa16.77■□□□□ 0.28
TNFRSF1A-201ENST00000162749 OR52W1Q6IF63 320 aa16.77■□□□□ 0.28
TNFRSF1A-201ENST00000162749 MKXQ8IYA7 352 aa16.77■□□□□ 0.28
TNFRSF1A-201ENST00000162749 OR8G5Q8NG78 346 aa16.77■□□□□ 0.28
TNFRSF1A-201ENST00000162749 RADILQ96JH8 1075 aa16.77■□□□□ 0.28
TNFRSF1A-201ENST00000162749 OR51I2Q9H344 312 aa16.77■□□□□ 0.28
TNFRSF1A-201ENST00000162749 PLEKHJ1Q9NW61 149 aa16.77■□□□□ 0.28
TNFRSF1A-201ENST00000162749 MPZP25189 248 aa16.77■□□□□ 0.27
TNFRSF1A-201ENST00000162749 GCH1P30793 250 aa16.77■□□□□ 0.27
TNFRSF1A-201ENST00000162749 H2BFSP57053 126 aa16.77■□□□□ 0.27
TNFRSF1A-201ENST00000162749 TSPAN5P62079 268 aa16.77■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ARFRP1Q13795 201 aa16.77■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ARL6IP1Q15041 203 aa16.77■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ELP2Q6IA86 826 aa16.77■□□□□ 0.27
TNFRSF1A-201ENST00000162749 OR10AD1Q8NGE0 317 aa16.77■□□□□ 0.27
TNFRSF1A-201ENST00000162749 MICU1Q9BPX6 476 aa16.77■□□□□ 0.27
TNFRSF1A-201ENST00000162749 IFT46Q9NQC8 304 aa16.77■□□□□ 0.27
TNFRSF1A-201ENST00000162749 NOP16Q9Y3C1 178 aaKnown RBP16.77■□□□□ 0.27
TNFRSF1A-201ENST00000162749 MLNRO43193 412 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 RAP2BP61225 183 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 NKX6-1P78426 367 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 DHODHQ02127 395 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 IDO2Q6ZQW0 420 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 DPCDQ9BVM2 203 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ALX4Q9H161 411 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 HSF4Q9ULV5 492 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 OSGIN2Q9Y236 505 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 PLSCR5A0PG75 271 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 UBE2QL1A1L167 161 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 H0YL77 283 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 SIX6O95475 246 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 AMY2AP04746 511 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 CHATP28329 748 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 IL24Q13007 206 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 MSMPQ1L6U9 139 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 RGS7BPQ6MZT1 257 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 OR2AK2Q8NG84 335 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FBXW5Q969U6 566 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 HS3ST6Q96QI5 342 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 TMEM100Q9NV29 134 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ANAPC10Q9UM13 185 aa16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 TMA7Q9Y2S6 64 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1A-201ENST00000162749 TRAPPC2LH3BP13 241 aa16.75■□□□□ 0.27
TNFRSF1A-201ENST00000162749 TIMM8AO60220 97 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FGF12P61328 243 aa16.75■□□□□ 0.27
TNFRSF1A-201ENST00000162749 SLC6A7Q99884 636 aa16.75■□□□□ 0.27
TNFRSF1A-201ENST00000162749 OCSTAMPQ9BR26 566 aa16.75■□□□□ 0.27
TNFRSF1A-201ENST00000162749 PKIBQ9C010 78 aa16.75■□□□□ 0.27
TNFRSF1A-201ENST00000162749 PKDREJQ9NTG1 2253 aa16.75■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ATP6V1G2-DDX39BF2Z307 99 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 CCL21O00585 134 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 RHBDL1O75783 438 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 SLC22A5O76082 557 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 CD40P25942 277 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 GLRXP35754 106 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 ZNF154Q13106 437 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 OR8G1Q15617 311 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 FAM209AQ5JX71 171 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 BPIFB2Q8N4F0 458 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 UXS1Q8NBZ7 420 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 OR13C8Q8NGS7 320 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 SPEF1Q9Y4P9 236 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 CACNA1BQ00975 2339 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 LRP5LA4QPB2 252 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 J3QT63 122 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 CA11O75493 328 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 CXCL2P19875 107 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 PDCD1Q15116 288 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 NHLRC3Q5JS37 347 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 Q6ZR03 302 aa16.74■□□□□ 0.27
TNFRSF1A-201ENST00000162749 SCCPDHQ8NBX0 429 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms