RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 TRAV9-1A0A075B6T8 112 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 RBFOX3A6NFN3 312 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 GABRA1P14867 456 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 SHC1P29353 583 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 HAAOP46952 286 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 OR2G6Q5TZ20 316 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM183AQ8IXX5 376 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 MUC20Q8N307 709 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 MRPL30Q8TCC3 161 aaKnown RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 C5AR2Q9P296 337 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 PLEKHB1Q9UF11 243 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 CCDC168Q8NDH2 2452 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 TRAV38-1A0A0B4J264 116 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 A0A1B0GTQ1 180 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 C7orf72A4D263 438 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 A8MWL6 223 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 HS3ST1O14792 307 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 NDUFA2O43678 99 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 DHRS2Q13268 280 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 GABRA6Q16445 453 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 C21orf62-AS1Q17RA5 79 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 B3GNT9Q6UX72 402 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 CLEC9AQ6UXN8 241 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 OR4D9Q8NGE8 314 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 MOB3AQ96BX8 217 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 HELTA6NFD8 242 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 OR2A4O95047 310 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 P01737 135 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 PGGT1BP53609 377 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 ZNF252P-AS1Q0IIN9 211 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 SLC25A40Q8TBP6 338 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 TMEM255BQ8WV15 326 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 IL17FQ96PD4 163 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 OR2A7Q96R45 310 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 ZIC5Q96T25 663 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 CXorf36Q9H7Y0 433 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 THAP10Q9P2Z0 257 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 C5orf49A4QMS7 147 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 CDX4O14627 284 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 QDPRP09417 244 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 OR5AL1P0C617 328 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 NME1P15531 152 aaKnown RBP5.45□□□□□ -1.54
VPS13D-201ENST00000011700 OPRK1P41145 380 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 TCF23Q7RTU1 214 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 HSD11B1LQ7Z5J1 315 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 SEC22AQ96IW7 307 aa5.45□□□□□ -1.54
VPS13D-201ENST00000011700 ADAMTS7Q9UKP4 1686 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A10PA6NDY2 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A18PA6NE21 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A16PA6NEW6 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A20PA6NIJ5 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A8PA6NJQ4 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A7PA6NKC0 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A22PA8MWA6 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A12PA8MX19 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A5PA8MXJ8 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A23PA8MXZ1 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A15PP0C7V4 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A13PP0C7W8 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A14PP0C7W9 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FAM90A24PP0C7X0 464 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 TAL1P17542 331 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FOXA1P55317 472 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 SIGIRRQ6IA17 410 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 FIZ1Q96SL8 496 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 SERTM2A0A1B0GWG4 89 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 MPC2O95563 127 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 C1orf220Q5T0J3 134 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 BTLAQ7Z6A9 289 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 CA13Q8N1Q1 262 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 HMGCLL1Q8TB92 370 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 YIPF6Q96EC8 236 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 DCAF16Q9NXF7 216 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 PRRC2AP48634 2157 aaKnown RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 M0R082 166 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 NDUFB3O43676 98 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 OR4A8P0C604 315 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 SRSF9Q13242 221 aaKnown RBP eCLIP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 MLF2Q15773 248 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 Q6AWC8 147 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 DHRS7BQ6IAN0 325 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 OR2C3Q8N628 320 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 WNT9BO14905 357 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 PDCD6O75340 191 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 MPGP29372 298 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 NPBWR2P48146 333 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 SULT1A1P50225 295 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 OR8G5Q8NG78 346 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 AKR7LQ8NHP1 331 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 H1FXQ92522 213 aaKnown RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 PDCD1LG2Q9BQ51 273 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 MRPL37Q9BZE1 423 aaKnown RBP5.44□□□□□ -1.54
VPS13D-201ENST00000011700 OR2J1Q9GZK6 312 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 RBKSQ9H477 322 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 IL19Q9UHD0 177 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 RPH3ALQ9UNE2 315 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 UBE2L5PA0A1B0GUS4 154 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 TRDCB7Z8K6 153 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 J3QW42 95 aa5.44□□□□□ -1.54
VPS13D-201ENST00000011700 M0QYG6 137 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms