RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 HLA-DMAP28067 261 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 GNG2P59768 71 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 HOXA4Q00056 320 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-232ENST00000641947 PNLIPRP3Q17RR3 467 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 C11orf53Q8IXP5 236 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 TMEM229BQ8NBD8 167 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 SNAPC3Q92966 411 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 CNTNAP3BQ96NU0 1288 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 SULT4A1Q9BR01 284 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 HDHD3Q9BSH5 251 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-232ENST00000641947 CNTNAP3Q9BZ76 1288 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 MRPL37Q9BZE1 423 aaKnown RBP14.93□□□□□ -0.02
PHGDH-232ENST00000641947 DPAGT1Q9H3H5 408 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 COQ3Q9NZJ6 369 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 NOP16Q9Y3C1 178 aaKnown RBP14.93□□□□□ -0.02
PHGDH-232ENST00000641947 LRBAP50851 2863 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 ZSCAN5BA6NJL1 495 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 TRAPPC2LH3BP13 241 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 M0QYG6 137 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 CDIPTO14735 213 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 TCRBP04435 133 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 GRPP07492 148 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 PRAMEF6Q5VXH4 476 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 STEAP1BQ6NZ63 245 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 NUP37Q8NFH4 326 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 OR56B4Q8NH76 319 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 RNASE6Q93091 150 aaKnown RBP14.93□□□□□ -0.02
PHGDH-232ENST00000641947 FBXW5Q969U6 566 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 FAAP24Q9BTP7 215 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 TINAGL1Q9GZM7 467 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-232ENST00000641947 NUDT15Q9NV35 164 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 MCUBQ9NWR8 336 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 TAS2R8Q9NYW2 309 aa14.93□□□□□ -0.02
PHGDH-232ENST00000641947 TRAV6A0A075B6T7 132 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 NAP1L6A6NFF2 107 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 CD74P04233 296 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 AKAIN1P0CW23 69 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 PPP3CBP16298 524 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 GNLYP22749 145 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 RCVRNP35243 200 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 KLF3P57682 345 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-232ENST00000641947 RAB25P57735 213 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 SPRNQ5BIV9 151 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 NHLRC3Q5JS37 347 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 RSBN1Q5VWQ0 802 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-232ENST00000641947 PRR7Q8TB68 274 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 EMG1Q92979 244 aaKnown RBP14.92□□□□□ -0.02
PHGDH-232ENST00000641947 PLEKHJ1Q9NW61 149 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 HSF4Q9ULV5 492 aa14.92□□□□□ -0.02
PHGDH-232ENST00000641947 TMEM210A6NLX4 147 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 CYB5AP00167 134 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 PRKACAP17612 351 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 DUSP1P28562 367 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 TAS2R19P59542 299 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 CD300CQ08708 224 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 ARFRP1Q13795 201 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 MPPED2Q15777 294 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 ADAM5Q6NVV9 412 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 ZNF826PQ6ZT77 177 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 OR13G1Q8NGZ3 307 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 LINC01560Q8TB33 94 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 MAFIPQ8WZ33 124 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 CREB3L1Q96BA8 519 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 CXXC4Q9H2H0 198 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 CA10Q9NS85 328 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 ZNF230Q9UIE0 474 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-232ENST00000641947 AK3Q9UIJ7 227 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 ERRFI1Q9UJM3 462 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-232ENST00000641947 FLVCR2Q9UPI3 526 aa14.91□□□□□ -0.02
PHGDH-232ENST00000641947 SERPINE3A8MV23 424 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 PFDN1O60925 122 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 OR7C1O76099 320 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-232ENST00000641947 ZNF735P0CB33 412 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 ERVK11-1P61568 191 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 TFF3Q07654 80 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 SLC22A25Q6T423 547 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 Q6ZPA2 131 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 DMRTC2Q8IXT2 367 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-232ENST00000641947 NEURL2Q9BR09 285 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 OCSTAMPQ9BR26 566 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 TLNRD1Q9H1K6 362 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 IFT46Q9NQC8 304 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 PCDHB16Q9NRJ7 776 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 SPTBN1Q01082 2364 aaKnown RBP14.9□□□□□ -0.02
PHGDH-232ENST00000641947 EPG5Q9HCE0 2579 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 ZNF736B4DX44 427 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-232ENST00000641947 INMT-MINDY4F8WBC2 141 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 PDCD6O75340 191 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 PGA5P0DJD9 388 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 NAT1P18440 290 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 RPS23P62266 143 aaKnown RBP14.9□□□□□ -0.02
PHGDH-232ENST00000641947 TATDN3Q17R31 274 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 SSX8Q7RTT4 187 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 FAM58AQ8N1B3 248 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 OR2Z1Q8NG97 314 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 OR51S1Q8NGJ8 323 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 CA5BP1Q8WTZ4 195 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 DEDD2Q8WXF8 326 aa14.9□□□□□ -0.02
PHGDH-232ENST00000641947 MRPL24Q96A35 216 aaKnown RBP14.9□□□□□ -0.02
PHGDH-232ENST00000641947 NRIP2Q9BQI9 281 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms