RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 RBM11P57052 281 aaKnown RBP14.63□□□□□ -0.07
PHGDH-229ENST00000641891 RAB1AP62820 205 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 PRDX4Q13162 271 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 RNPS1Q15287 305 aaKnown RBP14.63□□□□□ -0.07
PHGDH-229ENST00000641891 ZNF766Q5HY98 468 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 LRRC20Q8TCA0 184 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 NARFLQ9H6Q4 476 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 RNF122Q9H9V4 155 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 C14orf166Q9Y224 244 aaKnown RBP14.63□□□□□ -0.07
PHGDH-229ENST00000641891 STARD10Q9Y365 291 aa14.63□□□□□ -0.07
PHGDH-229ENST00000641891 PCNX2A6NKB5 2137 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 A0A0B4J2A0 478 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 CRYZL1O95825 349 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 HIKESHIQ53FT3 197 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 MRPL21Q7Z2W9 205 aaKnown RBP14.62□□□□□ -0.07
PHGDH-229ENST00000641891 INO80EQ8NBZ0 244 aaPredicted RBP14.62□□□□□ -0.07
PHGDH-229ENST00000641891 DEFB124Q8NES8 71 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 HPSE2Q8WWQ2 592 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 WDYHV1Q96HA8 205 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 CCDC120Q96HB5 630 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 METTL8Q9H825 291 aaKnown RBP14.62□□□□□ -0.07
PHGDH-229ENST00000641891 PARD6AQ9NPB6 346 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 ACKR4Q9NPB9 350 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 SHPKQ9UHJ6 478 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 KCNMB2Q9Y691 235 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 ARHGAP21Q5T5U3 1957 aa14.62□□□□□ -0.07
PHGDH-229ENST00000641891 SPAARA0A1B0GVQ0 90 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 ACTL6AO96019 429 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 HOXB5P09067 269 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 DTYMKP23919 212 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 GPM6AP51674 278 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 SURF2Q15527 256 aaPredicted RBP14.61□□□□□ -0.07
PHGDH-229ENST00000641891 STK11Q15831 433 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 SLC22A25Q6T423 547 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 SUMF1Q8NBK3 374 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 SLAMF9Q96A28 289 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 RRNAD1Q96FB5 475 aaKnown RBP14.61□□□□□ -0.07
PHGDH-229ENST00000641891 POM121L2Q96KW2 1035 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 HS3ST6Q96QI5 342 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 EDARQ9UNE0 448 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 PQLC2LA1A4F0 135 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 BCL3P20749 454 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 UNQ6126/PRO20091Q6UXV3 157 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 PDZD9Q8IXQ8 264 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 TOMM40LQ969M1 308 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 TECTBQ96PL2 329 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 FAM117AQ9C073 453 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 OR51B6Q9H340 312 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 OR5AC2Q9NZP5 309 aa14.61□□□□□ -0.07
PHGDH-229ENST00000641891 TRGV5A0A0B4J1U4 118 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 F8VVB4 439 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 F8VWA3 439 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 PDCD6O75340 191 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 IL18BPO95998 194 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 C1QTNF12Q5T7M4 302 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 NSUN5P2Q63ZY6 315 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 PIP4P1Q86T03 277 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 APOBEC3DQ96AK3 386 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-229ENST00000641891 MRPS24Q96EL2 167 aaKnown RBP14.6□□□□□ -0.07
PHGDH-229ENST00000641891 LINC00052Q96N35 136 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 ZNF552Q9H707 407 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-229ENST00000641891 NECAP2Q9NVZ3 263 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 F5H0A9 414 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-229ENST00000641891 NKX2-8O15522 239 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 OR7C1O76099 320 aaPredicted RBP14.6□□□□□ -0.07
PHGDH-229ENST00000641891 IFNA2P01563 188 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 COX5BP10606 129 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 HAAOP46952 286 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 CYCSP99999 105 aaKnown RBP14.6□□□□□ -0.07
PHGDH-229ENST00000641891 MALLQ13021 153 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 POC1AQ8NBT0 407 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 MED9Q9NWA0 146 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 IL36RNQ9UBH0 155 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 PFDN2Q9UHV9 154 aa14.6□□□□□ -0.07
PHGDH-229ENST00000641891 MSGN1A6NI15 193 aa14.59□□□□□ -0.07
PHGDH-229ENST00000641891 LGALS8O00214 317 aa14.59□□□□□ -0.07
PHGDH-229ENST00000641891 LILRA1O75019 489 aa14.59□□□□□ -0.07
PHGDH-229ENST00000641891 SS18L1O75177 396 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-229ENST00000641891 CTSDP07339 412 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-229ENST00000641891 ARR3P36575 388 aa14.59□□□□□ -0.07
PHGDH-229ENST00000641891 FXYD4P59646 89 aa14.59□□□□□ -0.07
PHGDH-229ENST00000641891 ARPC5LQ9BPX5 153 aa14.59□□□□□ -0.07
PHGDH-229ENST00000641891 RASL12Q9NYN1 266 aa14.59□□□□□ -0.07
PHGDH-229ENST00000641891 GSKIPQ9P0R6 139 aa14.59□□□□□ -0.07
PHGDH-229ENST00000641891 TRBV6-7A0A0A0MS04 114 aa14.58□□□□□ -0.07
PHGDH-229ENST00000641891 GALR2O43603 387 aaPredicted RBP14.58□□□□□ -0.07
PHGDH-229ENST00000641891 WNT5AP41221 380 aa14.58□□□□□ -0.07
PHGDH-229ENST00000641891 RAB32Q13637 225 aa14.58□□□□□ -0.07
PHGDH-229ENST00000641891 C5orf24Q7Z6I8 188 aa14.58□□□□□ -0.07
PHGDH-229ENST00000641891 ZDHHC23Q8IYP9 409 aa14.58□□□□□ -0.07
PHGDH-229ENST00000641891 C2orf50Q96LR7 162 aa14.58□□□□□ -0.07
PHGDH-229ENST00000641891 ZNF442Q9H7R0 627 aa14.58□□□□□ -0.07
PHGDH-229ENST00000641891 DECR2Q9NUI1 292 aa14.58□□□□□ -0.07
PHGDH-229ENST00000641891 TEX13DA0A0J9YY54 714 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-229ENST00000641891 CRYM-AS1A6NIL9 109 aa14.58□□□□□ -0.08
PHGDH-229ENST00000641891 SLC22A20A6NK97 555 aa14.58□□□□□ -0.08
PHGDH-229ENST00000641891 ZNF732B4DXR9 585 aa14.58□□□□□ -0.08
PHGDH-229ENST00000641891 FTH1P19P0C7X4 201 aa14.58□□□□□ -0.08
PHGDH-229ENST00000641891 RBMXP38159 391 aaKnown RBP14.58□□□□□ -0.08
PHGDH-229ENST00000641891 ECI1P42126 302 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms