RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	SMIM10	Q96HG1	83 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	NARS2	Q96I59	477 aa	Known RBP	4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	SGK494	Q96LW2	274 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	RNF145	Q96MT1	663 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	IL4I1	Q96RQ9	567 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	EBNA1BP2	Q99848	306 aa	Known RBP	4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	FUNDC2	Q9BWH2	189 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	PRRG4	Q9BZD6	226 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	RHOJ	Q9H4E5	214 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	PPP1R3E	Q9H7J1	279 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	SIX2	Q9NPC8	291 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	HINT3	Q9NQE9	182 aa	Known RBP	4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	SIRT7	Q9NRC8	400 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	PRTFDC1	Q9NRG1	225 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	TAS2R9	Q9NYW1	312 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	OPN4	Q9UHM6	478 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	MMACHC	Q9Y4U1	282 aa		4.27	□□□□□ -1.73
CASC19-256	ENST00000641746	TRAV24	A0A0B4J272	114 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	PRSS51	A0A1B0GVH4	220 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	TMEM213	A2RRL7	107 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	C9orf170	A2RU37	121 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	LRRC30	A6NM36	301 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	HACD1	B0YJ81	288 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	C17orf105	B2RV13	164 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	SULT1C2	O00338	296 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	CHEK1	O14757	476 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	WNT9B	O14905	357 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	SURF4	O15260	269 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	FADS1	O60427	444 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	ZNF780A	O75290	641 aa	Predicted RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	BANF1	O75531	89 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	PTTG1	O95997	202 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	TOMM40	O96008	361 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	HPR	P00739	348 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	FGG	P02679	453 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	ACSM4	P0C7M7	580 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	SLC35G6	P0C7Q6	338 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	PGAM1	P18669	254 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	PMCH	P20382	165 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	DCK	P27707	260 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	SRD5A2	P31213	254 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	KDELR2	P33947	212 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	COIL	P38432	576 aa	Predicted RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	NKX2-1	P43699	371 aa	Predicted RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	ZNF83	P51522	516 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	ARF6	P62330	175 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	KCNJ11	Q14654	390 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	PAFAH1B3	Q15102	231 aa	Known RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	TMED2	Q15363	201 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	RFX4	Q33E94	735 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	GLYR1	Q49A26	553 aa	Predicted RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	CDNF	Q49AH0	187 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	ACSBG2	Q5FVE4	666 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	ATAD3C	Q5T2N8	411 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	MEDAG	Q5VYS4	303 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	SLC27A4	Q6P1M0	643 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	ZNF534	Q76KX8	674 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	MON1B	Q7L1V2	547 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	CARM1	Q86X55	608 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	PHF13	Q86YI8	300 aa	Predicted RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	OR4N5	Q8IXE1	308 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	SYS1	Q8N2H4	156 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	OR52E5	Q8NH55	327 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	OR14A16	Q8NHC5	309 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	FAM110B	Q8TC76	370 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	SPPL2A	Q8TCT8	520 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	NEK7	Q8TDX7	302 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	SFT2D1	Q8WV19	159 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	SSMEM1	Q8WWF3	244 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	C12orf43	Q96C57	262 aa	Known RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	ISOC1	Q96CN7	298 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	MUCL1	Q96DR8	90 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	LGALS12	Q96DT0	336 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	NDUFAF3	Q9BU61	184 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	ULBP2	Q9BZM5	246 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	EFCAB1	Q9HAE3	211 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	SEBOX	Q9HB31	216 aa	Predicted RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	NANS	Q9NR45	359 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	INPP5E	Q9NRR6	644 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	MCUB	Q9NWR8	336 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	GNG12	Q9UBI6	72 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	IKZF2	Q9UKS7	526 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	PRPF19	Q9UMS4	504 aa	Known RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	WDR83OS	Q9Y284	106 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	SOX21	Q9Y651	276 aa	Predicted RBP	4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	HSPE1-MOB4	S4R3N1	261 aa		4.26	□□□□□ -1.73
CASC19-256	ENST00000641746	TRBV5-4	A0A0C4DH59	114 aa		4.25	□□□□□ -1.73
CASC19-256	ENST00000641746	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.25	□□□□□ -1.73
CASC19-256	ENST00000641746		A6NIZ1	184 aa		4.25	□□□□□ -1.73
CASC19-256	ENST00000641746		J3QRK9	145 aa		4.25	□□□□□ -1.73
CASC19-256	ENST00000641746		M0R1B8	84 aa		4.25	□□□□□ -1.73
CASC19-256	ENST00000641746	SC5D	O75845	299 aa		4.25	□□□□□ -1.73
CASC19-256	ENST00000641746	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.25	□□□□□ -1.73
CASC19-256	ENST00000641746	CT62	P0C5K7	136 aa		4.25	□□□□□ -1.73
CASC19-256	ENST00000641746	PSG1	P11464	419 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms