RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 LRP11Q86VZ4 500 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 OSR2Q8N2R0 312 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 NUP37Q8NFH4 326 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 GPX8Q8TED1 209 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 CA5BP1Q8WTZ4 195 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 TMEM171Q8WVE6 324 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 RAB3CQ96E17 227 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 SEH1LQ96EE3 360 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 Q96M66 194 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 PKIBQ9C010 78 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 KCNJ16Q9NPI9 418 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 KLK11Q9UBX7 282 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 MTFP1Q9UDX5 166 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 DUSP13Q9UII6 198 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 ELF5Q9UKW6 265 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-221ENST00000641573 CACNG2Q9Y698 323 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 LRP5LA4QPB2 252 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 MEIS3P1A6NDR6 274 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 TMEM210A6NLX4 147 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 CENPXA8MT69 81 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 TRAPPC2LH3BP13 241 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 J3QT63 122 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 ABCD4O14678 606 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 MLNRO43193 412 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 SYNGR1O43759 233 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 IGHV3-13P01766 116 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 LPLP06858 475 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 MELTFP08582 738 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 GSTP1P09211 210 aaKnown RBP11.14□□□□□ -0.63
PHGDH-221ENST00000641573 HIST1H1DP16402 221 aaKnown RBP11.14□□□□□ -0.63
PHGDH-221ENST00000641573 BCL3P20749 454 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 GABRR1P24046 479 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 BLVRBP30043 206 aaPredicted RBP11.14□□□□□ -0.63
PHGDH-221ENST00000641573 NPBWR2P48146 333 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 TMEM50BP56557 158 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 KLF3P57682 345 aaPredicted RBP11.14□□□□□ -0.63
PHGDH-221ENST00000641573 AP3S2P59780 193 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 CDSNQ15517 529 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 Q6ZR03 302 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 FBXL14Q8N1E6 418 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 BATF2Q8N1L9 274 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 Q8NFD4 153 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 OR13G1Q8NGZ3 307 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 ENKURQ8TC29 256 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 MRPS24Q96EL2 167 aaKnown RBP11.14□□□□□ -0.63
PHGDH-221ENST00000641573 ARHGAP5-AS1Q96IT6 56 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 NEDD4LQ96PU5 975 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 SYT3Q9BQG1 590 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 C7orf50Q9BRJ6 194 aaKnown RBP11.14□□□□□ -0.63
PHGDH-221ENST00000641573 CXXC4Q9H2H0 198 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 MSL2Q9HCI7 577 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 RBFOX1Q9NWB1 397 aaKnown RBP11.14□□□□□ -0.63
PHGDH-221ENST00000641573 NKIRAS2Q9NYR9 191 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 MTCH1Q9NZJ7 389 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 NDRG3Q9UGV2 375 aa11.14□□□□□ -0.63
PHGDH-221ENST00000641573 IGLV3-9A0A075B6K5 115 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 ANKRD20A5PA0PJZ0 165 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 MFNGO00587 321 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 AKR7A2O43488 359 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 MPZP25189 248 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 SORDQ00796 357 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 SSBP1Q04837 148 aaKnown RBP11.13□□□□□ -0.63
PHGDH-221ENST00000641573 IL24Q13007 206 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 DYRK1AQ13627 763 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 SNTB1Q13884 538 aaKnown RBP11.13□□□□□ -0.63
PHGDH-221ENST00000641573 TAF9Q16594 264 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 PNLIPRP3Q17RR3 467 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 PIGYQ3MUY2 71 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 FAM76BQ5HYJ3 339 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 ELP2Q6IA86 826 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 SLC22A25Q6T423 547 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 TGIF2LYQ8IUE0 185 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 SPERTQ8NA61 448 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 SCCPDHQ8NBX0 429 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 OR10AD1Q8NGE0 317 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 LINC01560Q8TB33 94 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 PECRQ9BY49 303 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 ATP23Q9Y6H3 246 aa11.13□□□□□ -0.63
PHGDH-221ENST00000641573 FAM240BA0A1B0GVZ2 78 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 A0A1B0GWJ7 208 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 F5H5P2 479 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 F8VVB4 439 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 F8VWA3 439 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 GEMIN2O14893 280 aaKnown RBP11.12□□□□□ -0.63
PHGDH-221ENST00000641573 MT-ND4P03905 459 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 GRPP07492 148 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 CSF1P09603 554 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 KIR2DL3P43628 341 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 RBM11P57052 281 aaKnown RBP11.12□□□□□ -0.63
PHGDH-221ENST00000641573 GNG2P59768 71 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 SELENOVP59797 346 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 FGF12P61328 243 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 ARL6IP1Q15041 203 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 PCGF3Q3KNV8 242 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 NKAPLQ5M9Q1 402 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 NCMAPQ5T1S8 102 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 OLFML2AQ68BL7 652 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 TRAPPC6BQ86SZ2 158 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 NUDCD2Q8WVJ2 157 aa11.12□□□□□ -0.63
PHGDH-221ENST00000641573 GTF3AQ92664 365 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms