RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 BCL3P20749 454 aa22.05■■□□□ 1.12
VEGFA-231ENST00000640499 TAS2R43P59537 309 aa22.05■■□□□ 1.12
VEGFA-231ENST00000640499 C11orf91Q3C1V1 193 aa22.05■■□□□ 1.12
VEGFA-231ENST00000640499 YIF1BQ5BJH7 314 aa22.05■■□□□ 1.12
VEGFA-231ENST00000640499 OR5D18Q8NGL1 313 aa22.05■■□□□ 1.12
VEGFA-231ENST00000640499 NANPQ8TBE9 248 aa22.05■■□□□ 1.12
VEGFA-231ENST00000640499 MND1Q9BWT6 205 aa22.05■■□□□ 1.12
VEGFA-231ENST00000640499 ELL3Q9HB65 397 aaPredicted RBP22.05■■□□□ 1.12
VEGFA-231ENST00000640499 SLC25A10Q9UBX3 287 aaPredicted RBP22.05■■□□□ 1.12
VEGFA-231ENST00000640499 TRBV5-7A0A0A0MS05 114 aa22.04■■□□□ 1.12
VEGFA-231ENST00000640499 DENRO43583 198 aaKnown RBP22.04■■□□□ 1.12
VEGFA-231ENST00000640499 ECDO95905 644 aaPredicted RBP22.04■■□□□ 1.12
VEGFA-231ENST00000640499 KNG1P01042 644 aa22.04■■□□□ 1.12
VEGFA-231ENST00000640499 MMP9P14780 707 aa22.04■■□□□ 1.12
VEGFA-231ENST00000640499 IGFBP3P17936 291 aaPredicted RBP22.04■■□□□ 1.12
VEGFA-231ENST00000640499 FGF12P61328 243 aa22.04■■□□□ 1.12
VEGFA-231ENST00000640499 BDH1Q02338 343 aa22.04■■□□□ 1.12
VEGFA-231ENST00000640499 SPHARQ15513 63 aa22.04■■□□□ 1.12
VEGFA-231ENST00000640499 KISS1Q15726 138 aa22.04■■□□□ 1.12
VEGFA-231ENST00000640499 LRRC10Q5BKY1 277 aa22.04■■□□□ 1.12
VEGFA-231ENST00000640499 MKXQ8IYA7 352 aa22.04■■□□□ 1.12
VEGFA-231ENST00000640499 UPRTQ96BW1 309 aa22.04■■□□□ 1.12
VEGFA-231ENST00000640499 NKX3-1Q99801 234 aaPredicted RBP22.04■■□□□ 1.12
VEGFA-231ENST00000640499 DCTN5Q9BTE1 182 aa22.04■■□□□ 1.12
VEGFA-231ENST00000640499 PIN1P1O15428 100 aa22.03■■□□□ 1.12
VEGFA-231ENST00000640499 RGS10O43665 173 aa22.03■■□□□ 1.12
VEGFA-231ENST00000640499 PPIAL4GP0DN37 164 aa22.03■■□□□ 1.12
VEGFA-231ENST00000640499 CALCBP10092 127 aa22.03■■□□□ 1.12
VEGFA-231ENST00000640499 RAB3AP20336 220 aa22.03■■□□□ 1.12
VEGFA-231ENST00000640499 CAV3P56539 151 aa22.03■■□□□ 1.12
VEGFA-231ENST00000640499 Q499Y3 187 aa22.03■■□□□ 1.12
VEGFA-231ENST00000640499 RBM48Q5RL73 367 aaKnown RBP22.03■■□□□ 1.12
VEGFA-231ENST00000640499 OR52N4Q8NGI2 321 aa22.03■■□□□ 1.12
VEGFA-231ENST00000640499 C8orf46Q8TAG6 207 aa22.03■■□□□ 1.12
VEGFA-231ENST00000640499 OR14A2Q96R54 314 aa22.03■■□□□ 1.12
VEGFA-231ENST00000640499 ATRQ13535 2644 aa22.02■■□□□ 1.12
VEGFA-231ENST00000640499 ZNF879B4DU55 563 aa22.02■■□□□ 1.12
VEGFA-231ENST00000640499 GPX5O75715 221 aa22.02■■□□□ 1.12
VEGFA-231ENST00000640499 KDM4BO94953 1096 aa22.02■■□□□ 1.12
VEGFA-231ENST00000640499 SFTPBP07988 381 aa22.02■■□□□ 1.12
VEGFA-231ENST00000640499 HCKP08631 526 aa22.02■■□□□ 1.12
VEGFA-231ENST00000640499 IGHV4-38-2P0DP08 117 aa22.02■■□□□ 1.12
VEGFA-231ENST00000640499 SRSF2Q01130 221 aaKnown RBP22.02■■□□□ 1.12
VEGFA-231ENST00000640499 TUSC1Q2TAM9 212 aa22.02■■□□□ 1.12
VEGFA-231ENST00000640499 TBX15Q96SF7 602 aa22.02■■□□□ 1.12
VEGFA-231ENST00000640499 SIRPDQ9H106 197 aa22.02■■□□□ 1.12
VEGFA-231ENST00000640499 OR14J1Q9UGF5 321 aa22.02■■□□□ 1.12
VEGFA-231ENST00000640499 TRAV8-7A0A075B6U6 113 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 A0A1W2PPK0 400 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 MAGEA13PA6NCF6 341 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 GPR37O15354 613 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 IFNA2P01563 188 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 CD2P06729 351 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 LIPFP07098 398 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 EPHA1P21709 976 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 MAP2K4P45985 399 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 INSL4Q14641 139 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 PRSS48Q7RTY5 328 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 ZNF561Q8N587 486 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 PNLDC1Q8NA58 520 aaKnown RBP22.01■■□□□ 1.11
VEGFA-231ENST00000640499 CNTD2Q9H8S5 307 aa22.01■■□□□ 1.11
VEGFA-231ENST00000640499 SOX21Q9Y651 276 aaPredicted RBP22.01■■□□□ 1.11
VEGFA-231ENST00000640499 GABRPO00591 440 aa22■■□□□ 1.11
VEGFA-231ENST00000640499 ZNF737O75373 536 aa22■■□□□ 1.11
VEGFA-231ENST00000640499 ALDOBP05062 364 aa22■■□□□ 1.11
VEGFA-231ENST00000640499 OCMP0CE72 109 aaPredicted RBP22■■□□□ 1.11
VEGFA-231ENST00000640499 ARF6P62330 175 aa22■■□□□ 1.11
VEGFA-231ENST00000640499 MED22Q15528 200 aa22■■□□□ 1.11
VEGFA-231ENST00000640499 SAXO1Q8IYX7 474 aa22■■□□□ 1.11
VEGFA-231ENST00000640499 FAM58AQ8N1B3 248 aa22■■□□□ 1.11
VEGFA-231ENST00000640499 TEX29Q8N6K0 151 aa22■■□□□ 1.11
VEGFA-231ENST00000640499 TMEM185AQ8NFB2 350 aa22■■□□□ 1.11
VEGFA-231ENST00000640499 EMG1Q92979 244 aaKnown RBP22■■□□□ 1.11
VEGFA-231ENST00000640499 DERL3Q96Q80 235 aa22■■□□□ 1.11
VEGFA-231ENST00000640499 HMG20AQ9NP66 347 aa22■■□□□ 1.11
VEGFA-231ENST00000640499 ZNF69Q9UC07 566 aa22■■□□□ 1.11
VEGFA-231ENST00000640499 IGHV3OR16-10A0A075B7F0 116 aa21.99■■□□□ 1.11
VEGFA-231ENST00000640499 TMEM82A0PJX8 343 aa21.99■■□□□ 1.11
VEGFA-231ENST00000640499 NDUFB7P17568 137 aa21.99■■□□□ 1.11
VEGFA-231ENST00000640499 DUSP1P28562 367 aa21.99■■□□□ 1.11
VEGFA-231ENST00000640499 GP2P55259 537 aaKnown RBP21.99■■□□□ 1.11
VEGFA-231ENST00000640499 COL10A1Q03692 680 aa21.99■■□□□ 1.11
VEGFA-231ENST00000640499 UNQ9370/PRO34162Q6UXP9 181 aa21.99■■□□□ 1.11
VEGFA-231ENST00000640499 Q8IYB0 196 aa21.99■■□□□ 1.11
VEGFA-231ENST00000640499 BCL6BQ8N143 479 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-231ENST00000640499 ZSCAN4Q8NAM6 433 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-231ENST00000640499 H1FXQ92522 213 aaKnown RBP21.99■■□□□ 1.11
VEGFA-231ENST00000640499 WDFY2Q96P53 400 aa21.99■■□□□ 1.11
VEGFA-231ENST00000640499 SEBOXQ9HB31 216 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-231ENST00000640499 TMEM138Q9NPI0 162 aa21.99■■□□□ 1.11
VEGFA-231ENST00000640499 NUP50Q9UKX7 468 aa21.99■■□□□ 1.11
VEGFA-231ENST00000640499 TMEM225BP0DP42 221 aa21.98■■□□□ 1.11
VEGFA-231ENST00000640499 ZNF146Q15072 292 aa21.98■■□□□ 1.11
VEGFA-231ENST00000640499 ARMCX4Q5H9R4 360 aa21.98■■□□□ 1.11
VEGFA-231ENST00000640499 ASCL4Q6XD76 172 aa21.98■■□□□ 1.11
VEGFA-231ENST00000640499 Q8N7P7 452 aa21.98■■□□□ 1.11
VEGFA-231ENST00000640499 C22orf15Q8WYQ4 148 aa21.98■■□□□ 1.11
VEGFA-231ENST00000640499 PCGF1Q9BSM1 259 aa21.98■■□□□ 1.11
VEGFA-231ENST00000640499 CCDC90BQ9GZT6 254 aa21.98■■□□□ 1.11
VEGFA-231ENST00000640499 NEK6Q9HC98 313 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms