RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 DSCAML1Q8TD84 2053 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 DNAH9Q9NYC9 4486 aa11.99□□□□□ -0.49
SYNE2-228ENST00000639659 TCRBV5S2A0A599 114 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 MAGEB4O15481 346 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-228ENST00000639659 ZNF737O75373 536 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 TTRP02766 147 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 HMGN1P05114 100 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 GRK1Q15835 563 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 ODF4Q2M2E3 257 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 SLC35D3Q5M8T2 416 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 PRAMEF5Q5TYX0 476 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 TMEM236Q5W0B7 351 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 CD300LDQ6UXZ3 194 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 RNF144BQ7Z419 303 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 PIGWQ7Z7B1 504 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 OR8H2Q8N162 312 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 LINC00482Q8N8I6 264 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 EMG1Q92979 244 aaKnown RBP11.98□□□□□ -0.49
SYNE2-228ENST00000639659 CADM1Q9BY67 442 aaKnown RBP11.98□□□□□ -0.49
SYNE2-228ENST00000639659 YIPF3Q9GZM5 350 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 TMEM133Q9H2Q1 129 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 MAGIXQ9H6Y5 334 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 PLEKHA1Q9HB21 404 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 NDE1Q9NXR1 346 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 NUFIP1Q9UHK0 495 aaKnown RBP11.98□□□□□ -0.49
SYNE2-228ENST00000639659 COPS3Q9UNS2 423 aa11.98□□□□□ -0.49
SYNE2-228ENST00000639659 TMEM82A0PJX8 343 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 NUDT19A8MXV4 375 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 F8VVB4 439 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 F8VWA3 439 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 DLGAP1O14490 977 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 GNGT2O14610 69 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 CST1P01037 141 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 IGHA1P01876 353 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 CALCBP10092 127 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 DUSP1P28562 367 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 BRS3P32247 399 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 ARHGDIBP52566 201 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 EGFEM1PQ0D2K5 195 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 LCN1P1Q5VSP4 162 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 BAIAP2L2Q6UXY1 529 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 KRT74Q7RTS7 529 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 C16orf82Q7Z2V1 217 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 DHFR2Q86XF0 187 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 MRPL41Q8IXM3 137 aaKnown RBP11.97□□□□□ -0.49
SYNE2-228ENST00000639659 ZNF679Q8IYX0 411 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 OR51D1Q8NGF3 324 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 CEP19Q96LK0 163 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 APOL4Q9BPW4 351 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 ZNF556Q9HAH1 456 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 LIN7BQ9HAP6 207 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 SLC7A11Q9UPY5 501 aa11.97□□□□□ -0.49
SYNE2-228ENST00000639659 FAM90A22PA8MWA6 464 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 ZNF254O75437 659 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 MMP23AO75900 390 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 HAND1O96004 215 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 IGLV3-1P01715 115 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 SLC2A5P22732 501 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 MPZP25189 248 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 PEX2P28328 305 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 RAB25P57735 213 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 ERVK11-1P61568 191 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 MEF2CQ06413 473 aaPredicted RBP11.96□□□□□ -0.49
SYNE2-228ENST00000639659 IL24Q13007 206 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 RBM39Q14498 530 aaKnown RBP11.96□□□□□ -0.49
SYNE2-228ENST00000639659 SNAPC1Q16533 368 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 SLX4IPQ5VYV7 408 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 DEGS2Q6QHC5 323 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 ZBTB49Q6ZSB9 765 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 ZNF329Q86UD4 541 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 EGFL6Q8IUX8 553 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 OR4P4Q8NGL7 312 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 ASB17Q8WXJ9 295 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 TFAP2CQ92754 450 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 SNX22Q96L94 193 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 TEX12Q9BXU0 123 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 PKIBQ9C010 78 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 TVP23BQ9NYZ1 205 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 IL36RNQ9UBH0 155 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 OR52A1Q9UKL2 312 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 LINC00312Q9Y6C7 94 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 V9GYS6 101 aa11.96□□□□□ -0.49
SYNE2-228ENST00000639659 PSMB11A5LHX3 300 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 E2F6O75461 281 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 RPP14O95059 124 aaKnown RBP11.95□□□□□ -0.5
SYNE2-228ENST00000639659 OSMP13725 252 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 TMEM42Q69YG0 159 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 UNQ9370/PRO34162Q6UXP9 181 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 ETV3LQ6ZN32 361 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 C8orf86Q6ZUL3 223 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 SLC25A26Q70HW3 274 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 TMEM179BQ7Z7N9 219 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 HS3ST5Q8IZT8 346 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 ABHD12Q8N2K0 398 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 OR52N4Q8NGI2 321 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 OR14K1Q8NGZ2 314 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 ITFG2Q969R8 447 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 CCDC124Q96CT7 223 aaKnown RBP11.95□□□□□ -0.5
SYNE2-228ENST00000639659 LRGUKQ96M69 825 aa11.95□□□□□ -0.5
SYNE2-228ENST00000639659 CNN2Q99439 309 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms