RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 TCF19Q9Y242 345 aa13.62□□□□□ -0.23
SMN2-216ENST00000638794 TBL2Q9Y4P3 447 aaKnown RBP13.62□□□□□ -0.23
SMN2-216ENST00000638794 DNAH3Q8TD57 4116 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 G3V2T6 193 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 SYT7O43581 403 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 INMTO95050 263 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 RBP4P02753 201 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 CHRM2P08172 466 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 EDDM3BP56851 147 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 FAM189A2Q15884 450 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 ATP6AP1Q15904 470 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 SSX2Q16385 188 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 KPRPQ5T749 579 aaPredicted RBP13.61□□□□□ -0.23
SMN2-216ENST00000638794 ZNF626Q68DY1 528 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 KDM4DQ6B0I6 523 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 GDPD3Q7L5L3 318 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 TCF23Q7RTU1 214 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 TMEM219Q86XT9 240 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 DTX3Q8N9I9 347 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 OR11H6Q8NGC7 330 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 SLAMF9Q96A28 289 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 MALSU1Q96EH3 234 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 CEP19Q96LK0 163 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 ABCB10Q9NRK6 738 aa13.61□□□□□ -0.23
SMN2-216ENST00000638794 A0A1W2PQL4 384 aaPredicted RBP13.6□□□□□ -0.23
SMN2-216ENST00000638794 TMEM82A0PJX8 343 aa13.6□□□□□ -0.23
SMN2-216ENST00000638794 A6NDX4 124 aa13.6□□□□□ -0.23
SMN2-216ENST00000638794 APOL3O95236 402 aa13.6□□□□□ -0.23
SMN2-216ENST00000638794 IGHV1-8P0DP01 117 aa13.6□□□□□ -0.23
SMN2-216ENST00000638794 OR8H2Q8N162 312 aa13.6□□□□□ -0.23
SMN2-216ENST00000638794 Q8N2B8 174 aa13.6□□□□□ -0.23
SMN2-216ENST00000638794 RPS4Y2Q8TD47 263 aa13.6□□□□□ -0.23
SMN2-216ENST00000638794 ZNF714Q96N38 554 aa13.6□□□□□ -0.23
SMN2-216ENST00000638794 CDCA4Q9BXL8 241 aa13.6□□□□□ -0.23
SMN2-216ENST00000638794 CHST5Q9GZS9 411 aa13.6□□□□□ -0.23
SMN2-216ENST00000638794 GABARAPL1Q9H0R8 117 aa13.6□□□□□ -0.23
SMN2-216ENST00000638794 WARS2Q9UGM6 360 aaKnown RBP13.6□□□□□ -0.23
SMN2-216ENST00000638794 METTL15A6NJ78 407 aa13.59□□□□□ -0.23
SMN2-216ENST00000638794 FBXO24O75426 580 aa13.59□□□□□ -0.23
SMN2-216ENST00000638794 GATBO75879 557 aaKnown RBP13.59□□□□□ -0.23
SMN2-216ENST00000638794 PRB2P02812 416 aaPredicted RBP13.59□□□□□ -0.23
SMN2-216ENST00000638794 CD28P10747 220 aa13.59□□□□□ -0.23
SMN2-216ENST00000638794 DYNC1I2Q13409 638 aaKnown RBP13.59□□□□□ -0.23
SMN2-216ENST00000638794 EDDM3AQ14507 147 aa13.59□□□□□ -0.23
SMN2-216ENST00000638794 CNN3Q15417 329 aaKnown RBP13.59□□□□□ -0.23
SMN2-216ENST00000638794 NSUN5P1Q3KNT7 163 aa13.59□□□□□ -0.23
SMN2-216ENST00000638794 SLC25A26Q70HW3 274 aa13.59□□□□□ -0.23
SMN2-216ENST00000638794 CIB1Q99828 191 aa13.59□□□□□ -0.23
SMN2-216ENST00000638794 IL36RNQ9UBH0 155 aa13.59□□□□□ -0.23
SMN2-216ENST00000638794 SULT1C4O75897 302 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 OR2T7P0C7T2 308 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 JUNBP17275 347 aaPredicted RBP13.58□□□□□ -0.24
SMN2-216ENST00000638794 HTR1FP30939 366 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 FUT6P51993 359 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 MEF2CQ06413 473 aaPredicted RBP13.58□□□□□ -0.24
SMN2-216ENST00000638794 ZDHHC13Q8IUH4 622 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 EGFL6Q8IUX8 553 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 PRSS35Q8N3Z0 413 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 TPRX1Q8N7U7 411 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 OR10H4Q8NGA5 316 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 BCAS4Q8TDM0 211 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 WIPF2Q8TF74 440 aaPredicted RBP13.58□□□□□ -0.24
SMN2-216ENST00000638794 EMG1Q92979 244 aaKnown RBP13.58□□□□□ -0.24
SMN2-216ENST00000638794 BORCS8Q96FH0 119 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 SNX22Q96L94 193 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 CHST6Q9GZX3 395 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 ENOPH1Q9UHY7 261 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 PITPNC1Q9UKF7 332 aa13.58□□□□□ -0.24
SMN2-216ENST00000638794 LOC107986453A0A1B0GWG9 222 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 hADV38S2A0JD32 116 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 HAND1O96004 215 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 IGHA1P01876 353 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 FASP25445 335 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 POLR2IP36954 125 aaKnown RBP13.57□□□□□ -0.24
SMN2-216ENST00000638794 DYNLT3P51808 116 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 ACTA2P62736 377 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 ACTG2P63267 376 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 ACTC1P68032 377 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 ACTA1P68133 377 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 Q6ZS46 218 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 AMIGO2Q86SJ2 522 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 ZNF676Q8N7Q3 588 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 CCDC54Q8NEL0 328 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 OR52N4Q8NGI2 321 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 OR5M11Q96RB7 305 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 ADI1Q9BV57 179 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 PRSS22Q9GZN4 317 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 MMP28Q9H239 520 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 RBFOX1Q9NWB1 397 aaKnown RBP13.57□□□□□ -0.24
SMN2-216ENST00000638794 HILPDAQ9Y5L2 63 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 LINC00312Q9Y6C7 94 aa13.57□□□□□ -0.24
SMN2-216ENST00000638794 IGHV2-26A0A0B4J1V2 119 aa13.56□□□□□ -0.24
SMN2-216ENST00000638794 F2RL2O00254 374 aa13.56□□□□□ -0.24
SMN2-216ENST00000638794 PSPNO60542 156 aa13.56□□□□□ -0.24
SMN2-216ENST00000638794 SERPINA3P01011 423 aa13.56□□□□□ -0.24
SMN2-216ENST00000638794 GABRR1P24046 479 aa13.56□□□□□ -0.24
SMN2-216ENST00000638794 ATP6V1E1P36543 226 aa13.56□□□□□ -0.24
SMN2-216ENST00000638794 KIR3DL2P43630 455 aa13.56□□□□□ -0.24
SMN2-216ENST00000638794 NPBWR2P48146 333 aa13.56□□□□□ -0.24
SMN2-216ENST00000638794 OR12D2P58182 307 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms