RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 A0A0J9YY10 115 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 A0A1B0GX78 115 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 BTNL10A8MVZ5 291 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 A8MWP6 167 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 KRBOX1C9JBD0 128 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 G3V2L1 256 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.5□□□□□ -2.01
VIM-210ENST00000637053 H7C417 338 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 I3L4J1 428 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 DNASE2O00115 360 aaPredicted RBP2.5□□□□□ -2.01
VIM-210ENST00000637053 GABRPO00591 440 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 RRHO14718 337 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 CCL25O15444 150 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 BUB3O43684 328 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 OR7C2O60412 319 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 SPAG7O75391 227 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 BMP15O95972 392 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 TOMM40O96008 361 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 DBIP07108 87 aaKnown RBP2.5□□□□□ -2.01
VIM-210ENST00000637053 IL3P08700 152 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 CT45A6P0DMU7 189 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 CT45A5P0DMU8 189 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 CT45A7P0DMV0 189 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 CD79AP11912 226 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 GP1BBP13224 206 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 AZU1P20160 251 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 RAB5AP20339 215 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 FGF7P21781 194 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 CBLP22681 906 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ZBTB25P24278 435 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 OPRL1P41146 370 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 TSFMP43897 325 aaKnown RBP2.5□□□□□ -2.01
VIM-210ENST00000637053 BACE1P56817 501 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 TAS2R30P59541 319 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 RPL27P61353 136 aaKnown RBP2.5□□□□□ -2.01
VIM-210ENST00000637053 SNRPD1P62314 119 aaKnown RBP2.5□□□□□ -2.01
VIM-210ENST00000637053 RPS28P62857 69 aaKnown RBP2.5□□□□□ -2.01
VIM-210ENST00000637053 HBA1P69905 142 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 RPL18AQ02543 176 aaKnown RBP2.5□□□□□ -2.01
VIM-210ENST00000637053 RBM39Q14498 530 aaKnown RBP2.5□□□□□ -2.01
VIM-210ENST00000637053 C16orf72Q14CZ0 275 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 FCN2Q15485 313 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ZNF284Q2VY69 593 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ALG10Q5BKT4 473 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 CT45A1Q5HYN5 189 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ALG10BQ5I7T1 473 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ANKRD22Q5VYY1 191 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 GLYATQ6IB77 296 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 NANOGP8Q6NSW7 305 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ZNF343Q6P1L6 599 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 GSG1LQ6UXU4 331 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 HSD17B13Q7Z5P4 300 aaPredicted RBP2.5□□□□□ -2.01
VIM-210ENST00000637053 CROCCP2Q86T23 111 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 CBLN2Q8IUK8 224 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 C1orf158Q8N1D5 194 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 GAPTQ8N292 157 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 GBGT1Q8N5D6 347 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 OR51A2Q8NGJ7 313 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 OR9I1Q8NGQ6 314 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 CT45A3Q8NHU0 189 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 SPATA3Q8NHX4 192 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 C8orf46Q8TAG6 207 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 THAP6Q8TBB0 222 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ARL11Q969Q4 196 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 HIST1H2BAQ96A08 127 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 EEF1AKMT3Q96AZ1 226 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 P2RY11Q96G91 374 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 DCUN1D1Q96GG9 259 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ADGRG7Q96K78 797 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 TP53RKQ96S44 253 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 SULT4A1Q9BR01 284 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ZNF649Q9BS31 505 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 DOHHQ9BU89 302 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 SNHG12Q9BXW3 62 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 NANOGQ9H9S0 305 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 CACYBPQ9HB71 228 aaKnown RBP2.5□□□□□ -2.01
VIM-210ENST00000637053 C14orf105Q9NVL8 296 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ASIC5Q9NY37 505 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 TAS2R16Q9NYV7 291 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ZNF224Q9NZL3 707 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ERG28Q9UKR5 140 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 PRNDQ9UKY0 176 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 RAB22AQ9UL26 194 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 SNX12Q9UMY4 172 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 POLR1DQ9Y2S0 133 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 UGT2A1Q9Y4X1 527 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 RFNGQ9Y644 331 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 R4GN57 208 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 MED14O60244 1454 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ABCC10Q5T3U5 1492 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 CCDC18Q5T9S5 1454 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 ARHGAP31Q2M1Z3 1444 aa2.5□□□□□ -2.01
VIM-210ENST00000637053 TMEM2Q9UHN6 1383 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 EIF4G3O43432 1585 aaKnown RBP2.49□□□□□ -2.01
VIM-210ENST00000637053 PCM1Q15154 2024 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 THOC2Q8NI27 1593 aaKnown RBP2.49□□□□□ -2.01
VIM-210ENST00000637053 WDR81Q562E7 1941 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 TRAV30A0A087WSZ9 112 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 A0A0A6YYD4 124 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 A0A0G2JLM5 398 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms