RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 SELENOHQ8IZQ5 122 aaKnown RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 CSNK1A1LQ8N752 337 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 MRPL43Q8N983 215 aaKnown RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 OR52L2PQ8NGH6 319 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 OR2T10Q8NGZ9 312 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 OR14C36Q8NHC7 312 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 GABRG3Q99928 467 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 ABHD6Q9BV23 337 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 GLIPR2Q9H4G4 154 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 C5orf66Q9H5L9 145 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 CGGBP1Q9UFW8 167 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-213ENST00000636759 GPR132Q9UNW8 380 aa6.03□□□□□ -1.44
SCN1A-213ENST00000636759 HEATR5AQ86XA9 2040 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 CACNA1CQ13936 2221 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 A0A087WV48 116 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 A0A1B0GTH9 108 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 GJE1A6NN92 205 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 HIDE1A8MVS5 230 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 C5orf67F2Z3F1 127 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 MTX2O75431 263 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 MMP23AO75900 390 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 S100GP29377 79 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 SQSTM1Q13501 440 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 ZNF77Q15935 545 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 Q7L0L9 218 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 CISD2Q8N5K1 135 aaKnown RBP6.02□□□□□ -1.45
SCN1A-213ENST00000636759 DTWD2Q8NBA8 298 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 OR5H2Q8NGV7 314 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 MRGPRFQ96AM1 343 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 CTHRC1Q96CG8 243 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 OR51I2Q9H344 312 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 SDF2L1Q9HCN8 221 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 HCFC1R1Q9NWW0 138 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 DHDHQ9UQ10 334 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 ZNF443Q9Y2A4 671 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-213ENST00000636759 C2orf16Q68DN1 1984 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 MEGF11A6BM72 1044 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 C4orf47A7E2U8 309 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 CORTO00230 105 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 XRCC2O43543 280 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 TRAF3IP2O43734 574 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-213ENST00000636759 NDUFB2O95178 105 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 MC5RP33032 325 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 DNASE1L1P49184 302 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 FUT5Q11128 374 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 CNN3Q15417 329 aaKnown RBP6.02□□□□□ -1.45
SCN1A-213ENST00000636759 DNM1P34Q6PK57 102 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 TMEM256Q8N2U0 113 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 TCTEX1D1Q8N7M0 179 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 ZNF740Q8NDX6 193 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 OR5AU1Q8NGC0 362 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 OR51A4Q8NGJ6 313 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 OR11L1Q8NGX0 322 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 OR2AJ1Q8NGZ0 328 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 CPT1CQ8TCG5 803 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 WFDC12Q8WWY7 111 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 IL17FQ96PD4 163 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 NMNAT3Q96T66 252 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 CCDC3Q9BQI4 270 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 ICAM5Q9UMF0 924 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 INSL6Q9Y581 213 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 KCNE3Q9Y6H6 103 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 TICRRQ7Z2Z1 1910 aa6.02□□□□□ -1.45
SCN1A-213ENST00000636759 A0A1W2PNV4 684 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 OR2AG2A6NM03 316 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 GNG7O60262 68 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 GLB1P16278 677 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 CSRP1P21291 193 aaKnown RBP6.01□□□□□ -1.45
SCN1A-213ENST00000636759 RAB38P57729 211 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 KRTDAPP60985 99 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 UBE2NP61088 152 aaKnown RBP6.01□□□□□ -1.45
SCN1A-213ENST00000636759 SPEM2Q0P670 501 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 PRDX4Q13162 271 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 GNMTQ14749 295 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 OR1Q1Q15612 314 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 MORN2Q502X0 79 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 ACTL10Q5JWF8 245 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 DCST2Q5T1A1 773 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 TMEM215Q68D42 235 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 C22orf39Q6P5X5 142 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 HSD11B1LQ7Z5J1 315 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 FAM89BQ8N5H3 189 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 OR2M7Q8NG81 312 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 FAM174AQ8TBP5 190 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 RPS4Y2Q8TD47 263 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 TMEM186Q96B77 213 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 SMIM7Q9BQ49 75 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 AICDAQ9GZX7 198 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 FBRSQ9HAH7 460 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 WFDC1Q9HC57 220 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 TRAPPC1Q9Y5R8 145 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 NSG1A0A0A6YYJ2 146 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 NPIPA5A0A0B4J1W7 369 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 ETV2O00321 342 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-213ENST00000636759 PLPP1O14494 284 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 CCL16O15467 120 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 MT-CO2P00403 227 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 HRASP01112 189 aa6.01□□□□□ -1.45
SCN1A-213ENST00000636759 PDGFBP01127 241 aaPredicted RBP6.01□□□□□ -1.45
SCN1A-213ENST00000636759 PFN1P07737 140 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms