RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 EPHA8P29322 1005 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 OTX2P32243 289 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 THBS4P35443 961 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 EIF1P41567 113 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 CBX5P45973 191 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 NPBWR2P48146 333 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 IGSF11Q5DX21 431 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 TDHQ8IZJ6 230 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 DNASE2BQ8WZ79 361 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 SPTSSAQ969W0 71 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 SLAMF9Q96A28 289 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 ZNF845Q96IR2 970 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 Q96M66 194 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 RSRP1Q9BUV0 290 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 METTL9Q9H1A3 318 aa12.2□□□□□ -0.46
CACNA1A-228ENST00000636610 NAAAQ02083 359 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 WIPI1Q5MNZ9 446 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 PROK2Q9HC23 129 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 PRR14LQ5THK1 2151 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 TNRC18O15417 2968 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 SVILO95425 2214 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 ZNF84P51523 738 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 H3F3AP84243 136 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 ZNF92Q03936 586 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 VASH2Q86V25 355 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 MYPOPQ86VE0 399 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 RPS19BP1Q86WX3 136 aaKnown RBP12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 FADS6Q8N9I5 356 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 ABHD3Q8WU67 409 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 NAA11Q9BSU3 229 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 PAPOLGQ9BWT3 736 aaKnown RBP12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 SEC11CQ9BY50 192 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 CFAP47Q6ZTR5 3102 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 GPR37O15354 613 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 NDUFA2O43678 99 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 KLK3P07288 261 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 LIFP15018 202 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 CAMLGP49069 296 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 IL15RAQ13261 267 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 LYSMD4Q5XG99 296 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 PLCXD3Q63HM9 321 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 TMEM123Q8N131 208 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 TMEM217Q8N7C4 229 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 IFI44Q8TCB0 444 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 PP6455Q8WZ26 134 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 HS3ST6Q96QI5 342 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 SPACA1Q9HBV2 294 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 FANCFQ9NPI8 374 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 IL36RNQ9UBH0 155 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 ANAPC10Q9UM13 185 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 HS3ST3B1Q9Y662 390 aa12.19□□□□□ -0.46
CACNA1A-228ENST00000636610 FOXI3A8MTJ6 420 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 ZNF587BE7ETH6 402 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 ETV2O00321 342 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 DEDDO75618 318 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 NRASP01111 189 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 FCGR3AP08637 254 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 JMJD7P0C870 316 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 LSM6P62312 80 aaKnown RBP12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 CEACAM16Q2WEN9 425 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 ZNF528Q3MIS6 628 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 AVPI1Q5T686 147 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 FBXW12Q6X9E4 464 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 RBMS3Q6XE24 437 aaKnown RBP12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 TMEM182Q6ZP80 229 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 CALHM1Q8IU99 346 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 SPEM1Q8N4L4 309 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 SMIM8Q96KF7 97 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 ABHD14AQ9BUJ0 271 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 SLC2A9Q9NRM0 540 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 KCNIP3Q9Y2W7 256 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 hCG_1809904A0A1W2PP81 198 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 A0A1W2PR64 198 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 A0A1W2PRV1 198 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 CST4P01036 141 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 SSR4P51571 173 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 OR2B8PP59922 312 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 SHEQ5VZ18 495 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 NSUN5P2Q63ZY6 315 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 DHRS7BQ6IAN0 325 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 FAM180AQ6UWF9 173 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 SLC25A26Q70HW3 274 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 SLC16A13Q7RTY0 426 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 CARFQ8N187 725 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 UBALD1Q8TB05 177 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 NEK7Q8TDX7 302 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 CARHSP1Q9Y2V2 147 aaKnown RBP12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 V9GYS6 101 aa12.18□□□□□ -0.46
CACNA1A-228ENST00000636610 DOCK10Q96BY6 2186 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 CRYM-AS1A6NIL9 109 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 A6NLC8 198 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 CEACAM18A8MTB9 384 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 CDRT15L2A8MXV6 281 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 RBP2P50120 134 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 SUCLG1P53597 346 aaKnown RBP12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 HNF4GQ14541 408 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 MRPL14Q6P1L8 145 aaKnown RBP12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 FAM213BQ8TBF2 198 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 GLYATL2Q8WU03 294 aa12.17□□□□□ -0.46
CACNA1A-228ENST00000636610 COL5A1P20908 1838 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms