RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 FAM90A5PA8MXJ8 464 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 IGHG2P01859 326 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 FAM90A15PP0C7V4 464 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 FAM90A13PP0C7W8 464 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 FAM90A14PP0C7W9 464 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 FAM90A24PP0C7X0 464 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 FAM106CPP0CH98 169 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 CLUP10909 449 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 SPI1P17947 270 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 HAAOP46952 286 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 ERVK11-1P61568 191 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 PNLIPRP3Q17RR3 467 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 TPTE2P1Q5T6R2 138 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 LINC01590Q5TEZ4 76 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 METTL21CQ5VZV1 264 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 PLCXD3Q63HM9 321 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 RTN4RL2Q86UN3 420 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 THNSL2Q86YJ6 484 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 OR6K6Q8NGW6 343 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 OR6N2Q8NGY6 317 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 POLDIP2Q9Y2S7 368 aa14.18□□□□□ -0.14
CLN6-212ENST00000636020 ARRDC5A6NEK1 342 aa14.17□□□□□ -0.14
CLN6-212ENST00000636020 TRIM64CA6NLI5 447 aa14.17□□□□□ -0.14
CLN6-212ENST00000636020 LY6LH3BQJ8 138 aa14.17□□□□□ -0.14
CLN6-212ENST00000636020 CRMP1Q14194 572 aa14.17□□□□□ -0.14
CLN6-212ENST00000636020 EDDM3AQ14507 147 aa14.17□□□□□ -0.14
CLN6-212ENST00000636020 CXorf66Q5JRM2 361 aaPredicted RBP14.17□□□□□ -0.14
CLN6-212ENST00000636020 SLC35E3Q7Z769 313 aa14.17□□□□□ -0.14
CLN6-212ENST00000636020 ZNF573Q86YE8 665 aa14.17□□□□□ -0.14
CLN6-212ENST00000636020 TPRX1Q8N7U7 411 aa14.17□□□□□ -0.14
CLN6-212ENST00000636020 RNF152Q8N8N0 203 aa14.17□□□□□ -0.14
CLN6-212ENST00000636020 SNX22Q96L94 193 aa14.17□□□□□ -0.14
CLN6-212ENST00000636020 EGLN3Q9H6Z9 239 aa14.17□□□□□ -0.14
CLN6-212ENST00000636020 TMEM82A0PJX8 343 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 LINC01548A6NM66 108 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 GSTA4O15217 222 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 FGF16O43320 207 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 SPNP16150 400 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 CEACAM3P40198 252 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 MNDAP41218 407 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 BLVRAP53004 296 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 LIPEQ05469 1076 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 TSPAN31Q12999 210 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.16□□□□□ -0.14
CLN6-212ENST00000636020 ERI1Q8IV48 349 aaKnown RBP14.16□□□□□ -0.14
CLN6-212ENST00000636020 FOXRED2Q8IWF2 684 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 ITFG2Q969R8 447 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 INTS14Q96SY0 518 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 NIPAL2Q9H841 368 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 DCAF13Q9NV06 445 aaKnown RBP14.16□□□□□ -0.14
CLN6-212ENST00000636020 AP3M1Q9Y2T2 418 aa14.16□□□□□ -0.14
CLN6-212ENST00000636020 KMT2AQ03164 3969 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 OOSP1A8MZH6 123 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 BUB1B-PAK6H3BSN5 160 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 PSMD9O00233 223 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 GP9P14770 177 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 MPZP25189 248 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 FOXE3Q13461 319 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 PRAMEF5Q5TYX0 476 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 OR52W1Q6IF63 320 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 CCDC144NLQ6NUI1 221 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 SHFQ7M4L6 423 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 ZNF429Q86V71 674 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 SLC15A3Q8IY34 581 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 OR52L1Q8NGH7 329 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 GNPDA2Q8TDQ7 276 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 C4orf3Q8WVX3 66 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 CREB3L1Q96BA8 519 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 CDH10Q9Y6N8 788 aa14.15□□□□□ -0.14
CLN6-212ENST00000636020 GADD45GO95257 159 aa14.14□□□□□ -0.15
CLN6-212ENST00000636020 CD34P28906 385 aa14.14□□□□□ -0.15
CLN6-212ENST00000636020 SMIM11AP58511 58 aa14.14□□□□□ -0.15
CLN6-212ENST00000636020 PSMA6P60900 246 aaKnown RBP14.14□□□□□ -0.15
CLN6-212ENST00000636020 ESRRGP62508 458 aa14.14□□□□□ -0.15
CLN6-212ENST00000636020 RIPPLY1Q0D2K3 151 aa14.14□□□□□ -0.15
CLN6-212ENST00000636020 GPR50Q13585 617 aa14.14□□□□□ -0.15
CLN6-212ENST00000636020 HLA-DRB5Q30154 266 aa14.14□□□□□ -0.15
CLN6-212ENST00000636020 LCN1P1Q5VSP4 162 aa14.14□□□□□ -0.15
CLN6-212ENST00000636020 TRPM8Q7Z2W7 1104 aa14.14□□□□□ -0.15
CLN6-212ENST00000636020 OR11H1Q8NG94 326 aa14.14□□□□□ -0.15
CLN6-212ENST00000636020 KIAA2026Q5HYC2 2103 aa14.14□□□□□ -0.15
CLN6-212ENST00000636020 HECTD4Q9Y4D8 3996 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 A0A0U1RQV5 110 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 PQLC2LA1A4F0 135 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 FAM172BPA6NC97 362 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 PRR23D1E9PI22 279 aaPredicted RBP14.13□□□□□ -0.15
CLN6-212ENST00000636020 DCTN3O75935 186 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 NRASP01111 189 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 ELANEP08246 267 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 PRR23D2P0DMB1 279 aaPredicted RBP14.13□□□□□ -0.15
CLN6-212ENST00000636020 ATP6V1B1P15313 513 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 IFNGR2P38484 337 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 KLF10Q13118 480 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 ZNF684Q5T5D7 378 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 RPL13AP3Q6NVV1 102 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 HEPN1Q6WQI6 88 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 OR52N4Q8NGI2 321 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 OR8D4Q8NGM9 314 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 FAM162AQ96A26 154 aa14.13□□□□□ -0.15
CLN6-212ENST00000636020 ZNF286AQ9HBT8 521 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms