RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 OR2V1Q8NHB1 315 aa13.47□□□□□ -0.25
CLN8-209ENST00000635970 SFT2D1Q8WV19 159 aa13.47□□□□□ -0.25
CLN8-209ENST00000635970 RNF133Q8WVZ7 376 aa13.47□□□□□ -0.25
CLN8-209ENST00000635970 TMED6Q8WW62 240 aa13.47□□□□□ -0.25
CLN8-209ENST00000635970 ARL5BQ96KC2 179 aa13.47□□□□□ -0.25
CLN8-209ENST00000635970 OR5B2Q96R09 309 aa13.47□□□□□ -0.25
CLN8-209ENST00000635970 SRXN1Q9BYN0 137 aa13.47□□□□□ -0.25
CLN8-209ENST00000635970 RHOFQ9HBH0 211 aa13.47□□□□□ -0.25
CLN8-209ENST00000635970 SERINC1Q9NRX5 453 aa13.47□□□□□ -0.25
CLN8-209ENST00000635970 CLCF1Q9UBD9 225 aa13.47□□□□□ -0.25
CLN8-209ENST00000635970 CLEC18AA5D8T8 446 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 CXCL13O43927 109 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 PLGP00747 810 aaPredicted RBP13.46□□□□□ -0.25
CLN8-209ENST00000635970 H2BFMP0C1H6 154 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 DAP3P51398 398 aaKnown RBP13.46□□□□□ -0.25
CLN8-209ENST00000635970 AKR1C2P52895 323 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 AKR1C1Q04828 323 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 PEA15Q15121 130 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 MST1LQ2TV78 715 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 RNF212Q495C1 297 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 OR52W1Q6IF63 320 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 ZNF529Q6P280 563 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 CLEC18BQ6UXF7 455 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 DCXRQ7Z4W1 244 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 LURAP1LQ8IV03 231 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 C15orf54Q8N8G6 183 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 C9orf106Q8NAJ2 232 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 CLEC18CQ8NCF0 446 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 NAXEQ8NCW5 288 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 FNDC9Q8TBE3 224 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 EGLN1Q9GZT9 426 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 SMCO4Q9NRQ5 59 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 ASH2LQ9UBL3 628 aa13.46□□□□□ -0.25
CLN8-209ENST00000635970 ZMAT5Q9UDW3 170 aaKnown RBP13.46□□□□□ -0.25
CLN8-209ENST00000635970 LOC100509620A0A075B734 347 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 SMAD9O15198 467 aaKnown RBP13.45□□□□□ -0.26
CLN8-209ENST00000635970 SPP1P10451 314 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 FPR2P25090 351 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 PTGER4P35408 488 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 OR7A5Q15622 319 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 SWI5Q1ZZU3 235 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 KLHL24Q6TFL4 600 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 NAA40Q86UY6 237 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 MARCH1Q8TCQ1 289 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 RXFP4Q8TDU9 374 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 FGGYQ96C11 551 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 C2orf50Q96LR7 162 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 MICU1Q9BPX6 476 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 SEC61A2Q9H9S3 476 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 MYEF2Q9P2K5 600 aaKnown RBP13.45□□□□□ -0.26
CLN8-209ENST00000635970 FLVCR1Q9Y5Y0 555 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 MEX3AA1L020 520 aaKnown RBP13.45□□□□□ -0.26
CLN8-209ENST00000635970 GJE1A6NN92 205 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 MFNGO00587 321 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 CSTBP04080 98 aaKnown RBP13.45□□□□□ -0.26
CLN8-209ENST00000635970 CD5P06127 495 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 KLK2P20151 261 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 NPBWR1P48145 328 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 CDSNQ15517 529 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 GFOD2Q3B7J2 385 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 PEG10Q86TG7 708 aaKnown RBP13.45□□□□□ -0.26
CLN8-209ENST00000635970 TMEM200AQ86VY9 491 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 RRNAD1Q96FB5 475 aaKnown RBP13.45□□□□□ -0.26
CLN8-209ENST00000635970 FOXN4Q96NZ1 517 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 NKX3-1Q99801 234 aaPredicted RBP13.45□□□□□ -0.26
CLN8-209ENST00000635970 OCSTAMPQ9BR26 566 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 MOB1AQ9H8S9 216 aa13.45□□□□□ -0.26
CLN8-209ENST00000635970 IGHV3-15A0A0B4J1V0 119 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 A0A0G2JNJ9 132 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 MBD3L4A6NDZ8 208 aaPredicted RBP13.44□□□□□ -0.26
CLN8-209ENST00000635970 MBD3L3A6NE82 208 aaPredicted RBP13.44□□□□□ -0.26
CLN8-209ENST00000635970 MBD3L5A6NJ08 208 aaPredicted RBP13.44□□□□□ -0.26
CLN8-209ENST00000635970 SLC22A20A6NK97 555 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 RNASEK-C17orf49H0YIS7 233 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 H0YIZ8 118 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 SSX5O60225 188 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 SMIM6P0DI80 62 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 GNB3P16520 340 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 SRSF3P84103 164 aaKnown RBP13.44□□□□□ -0.26
CLN8-209ENST00000635970 MYBPHQ13203 477 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 GCNT2Q8N0V5 402 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 MBD3L2Q8NHZ7 208 aaPredicted RBP13.44□□□□□ -0.26
CLN8-209ENST00000635970 KCNG3Q8TAE7 436 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 SLC25A43Q8WUT9 341 aaPredicted RBP13.44□□□□□ -0.26
CLN8-209ENST00000635970 SLC5A7Q9GZV3 580 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 FN3KRPQ9HA64 309 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 CALHM2Q9HA72 323 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 PARP11Q9NR21 331 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 FAM206AQ9NX38 181 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 Q9UFV3 132 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 LRRK2Q5S007 2527 aa13.44□□□□□ -0.26
CLN8-209ENST00000635970 INTS1Q8N201 2190 aaKnown RBP13.43□□□□□ -0.26
CLN8-209ENST00000635970 P2RY10O00398 339 aa13.43□□□□□ -0.26
CLN8-209ENST00000635970 SYT7O43581 403 aa13.43□□□□□ -0.26
CLN8-209ENST00000635970 PMP2P02689 132 aa13.43□□□□□ -0.26
CLN8-209ENST00000635970 GNALP38405 381 aa13.43□□□□□ -0.26
CLN8-209ENST00000635970 SULT1A2P50226 295 aa13.43□□□□□ -0.26
CLN8-209ENST00000635970 CARD18P57730 90 aa13.43□□□□□ -0.26
CLN8-209ENST00000635970 SURF2Q15527 256 aaPredicted RBP13.43□□□□□ -0.26
CLN8-209ENST00000635970 ZNF239Q16600 458 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms