RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 GIPC3Q8TF64 312 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 SLC25A33Q9BSK2 321 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 PKIBQ9C010 78 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 TMEM133Q9H2Q1 129 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 NDE1Q9NXR1 346 aa12.48□□□□□ -0.41
PDLIM3-213ENST00000629667 A6NIN4 97 aa12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 TTRP02766 147 aa12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 ARHGDIBP52566 201 aa12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 IL24Q13007 206 aa12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 APOFQ13790 326 aa12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 FAM98BQ52LJ0 330 aaKnown RBP12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 RNF144BQ7Z419 303 aa12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 MRPL41Q8IXM3 137 aaKnown RBP12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 BCAS4Q8TDM0 211 aa12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 SNX22Q96L94 193 aa12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 ZNF649Q9BS31 505 aa12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 MCRIP2Q9BUT9 160 aaKnown RBP12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 TTTY10Q9BZA0 68 aa12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 IKZF2Q9UKS7 526 aa12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 LINC00312Q9Y6C7 94 aa12.47□□□□□ -0.41
PDLIM3-213ENST00000629667 TCRBV5S2A0A599 114 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 LOC110117498-PIK3R3F6TDL0 507 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 MRPL3P09001 348 aaKnown RBP12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 CCDC159P0C7I6 412 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 SLC2A5P22732 501 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 ROM1Q03395 351 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 MFGE8Q08431 387 aaPredicted RBP12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 GK3PQ14409 553 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 C9orf152Q5JTZ5 239 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 TPRX1Q8N7U7 411 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 OR4P4Q8NGL7 312 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 TRMT10AQ8TBZ6 339 aaKnown RBP12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 ASB17Q8WXJ9 295 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 CEP19Q96LK0 163 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 RBM14Q96PK6 669 aaKnown RBP12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 DPM3Q9P2X0 92 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 DNAJB9Q9UBS3 223 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 TAGLN3Q9UI15 199 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 TMEM14AQ9Y6G1 99 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 V9GYS6 101 aa12.46□□□□□ -0.41
PDLIM3-213ENST00000629667 FAM230AA0A1W2PPH8 454 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 TMEM82A0PJX8 343 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 SH2D7A6NKC9 451 aaPredicted RBP12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 PRR32B1ATL7 298 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 OR2F2O95006 317 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 NHLRC4P0CG21 123 aaPredicted RBP12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 PEX2P28328 305 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 GRK1Q15835 563 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 HSP90B2PQ58FF3 399 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 BCL2L15Q5TBC7 163 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 SLX4IPQ5VYV7 408 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 UNQ9370/PRO34162Q6UXP9 181 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 TRAPPC6BQ86SZ2 158 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 OSR2Q8N2R0 312 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 OR14K1Q8NGZ2 314 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 TEX12Q9BXU0 123 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 CHST6Q9GZX3 395 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 FAM107BQ9H098 131 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 MOB1AQ9H8S9 216 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 PAPOLBQ9NRJ5 636 aaKnown RBP12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 MTCH1Q9NZJ7 389 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 ZMAT5Q9UDW3 170 aaKnown RBP12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 SLC7A11Q9UPY5 501 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 U3KQK5 164 aa12.45□□□□□ -0.42
PDLIM3-213ENST00000629667 PSMB11A5LHX3 300 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 ARRDC5A6NEK1 342 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 F8VVB4 439 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 F8VWA3 439 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 E2F6O75461 281 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 INMTO95050 263 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 OSMP13725 252 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 GABRR1P24046 479 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 THBS3P49746 956 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 CDK5Q00535 292 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 OR52W1Q6IF63 320 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 ETV3LQ6ZN32 361 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 DHFR2Q86XF0 187 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 EGFL6Q8IUX8 553 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 ABHD12Q8N2K0 398 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 ZNF596Q8TC21 504 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 SLAMF9Q96A28 289 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 CADM1Q9BY67 442 aaKnown RBP12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 ZNF556Q9HAH1 456 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 ARL8BQ9NVJ2 186 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 OR52A1Q9UKL2 312 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 COPS3Q9UNS2 423 aa12.44□□□□□ -0.42
PDLIM3-213ENST00000629667 KIAA2026Q5HYC2 2103 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 DHRS7CA6NNS2 312 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 LEUTXA8MZ59 168 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 M0QZK8 103 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 MMP23AO75900 390 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 HAND1O96004 215 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 CST1P01037 141 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 IGHA1P01876 353 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 AMY1AP04745 511 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 AMY2AP04746 511 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 LMO1P25800 156 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 ACTR3P61158 418 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 DGCR2P98153 550 aa12.43□□□□□ -0.42
PDLIM3-213ENST00000629667 BDH1Q02338 343 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms