RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 NLRC3Q7RTR2 1065 aa12.29□□□□□ -0.44
PNKP-221ENST00000627317 LRRTM1Q86UE6 522 aa12.29□□□□□ -0.44
PNKP-221ENST00000627317 CDH26Q8IXH8 852 aa12.29□□□□□ -0.44
PNKP-221ENST00000627317 EMG1Q92979 244 aaKnown RBP12.29□□□□□ -0.44
PNKP-221ENST00000627317 C12orf43Q96C57 262 aaKnown RBP12.29□□□□□ -0.44
PNKP-221ENST00000627317 S100A13Q99584 98 aa12.29□□□□□ -0.44
PNKP-221ENST00000627317 CHCHD6Q9BRQ6 235 aa12.29□□□□□ -0.44
PNKP-221ENST00000627317 OR51E2Q9H255 320 aa12.29□□□□□ -0.44
PNKP-221ENST00000627317 PATZ1Q9HBE1 687 aaKnown RBP12.29□□□□□ -0.44
PNKP-221ENST00000627317 MTCH1Q9NZJ7 389 aa12.29□□□□□ -0.44
PNKP-221ENST00000627317 MIOXQ9UGB7 285 aa12.29□□□□□ -0.44
PNKP-221ENST00000627317 GSTK1Q9Y2Q3 226 aa12.29□□□□□ -0.44
PNKP-221ENST00000627317 OR2AT4A6NND4 320 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 ADAM20O43506 726 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 NDUFA2O43678 99 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 ADRA2CP18825 462 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 PTGFRP43088 359 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 ERVK11-1P61568 191 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 LMO4P61968 165 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 GLT8D1Q68CQ7 371 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 STUMQ69YW2 141 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 FAM166AQ6J272 317 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 PXT1Q8NFP0 134 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 OR5T2Q8NGG2 359 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 OR8B3Q8NGG8 313 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 NEIL1Q96FI4 390 aaPredicted RBP12.28□□□□□ -0.44
PNKP-221ENST00000627317 OR8B2Q96RD0 313 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 HES4Q9HCC6 221 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 RBFOX1Q9NWB1 397 aaKnown RBP12.28□□□□□ -0.44
PNKP-221ENST00000627317 TXNL4BQ9NX01 149 aaKnown RBP12.28□□□□□ -0.44
PNKP-221ENST00000627317 CDC42EP3Q9UKI2 254 aa12.28□□□□□ -0.44
PNKP-221ENST00000627317 MRPS28Q9Y2Q9 187 aaKnown RBP12.28□□□□□ -0.44
PNKP-221ENST00000627317 IGKV1-12A0A0C4DH73 117 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 F5H0A9 414 aaPredicted RBP12.27□□□□□ -0.45
PNKP-221ENST00000627317 F8VVB4 439 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 F8VWA3 439 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 KDM4BO94953 1096 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 KNG1P01042 644 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 IGKV1D-12P01611 117 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 PRKACAP17612 351 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 FGF9P31371 208 aaPredicted RBP12.27□□□□□ -0.45
PNKP-221ENST00000627317 GABRA2P47869 451 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 NPBWR2P48146 333 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 PITPNBP48739 271 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 RSU1Q15404 277 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 ESCO2Q56NI9 601 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 AWAT2Q6E213 333 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 LYPD2Q6UXB3 125 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 SLC36A1Q7Z2H8 476 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 FAM58AQ8N1B3 248 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 FOXRED1Q96CU9 486 aaPredicted RBP12.27□□□□□ -0.45
PNKP-221ENST00000627317 YIPF6Q96EC8 236 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 UQCC2Q9BRT2 126 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 METTL9Q9H1A3 318 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 CNTD2Q9H8S5 307 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 RHOFQ9HBH0 211 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 OR14J1Q9UGF5 321 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 ING4Q9UNL4 249 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 STAB1Q9NY15 2570 aa12.27□□□□□ -0.45
PNKP-221ENST00000627317 TRAV1-2A0A0B4J238 106 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 PDCD5O14737 125 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 TMPRSS2O15393 492 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 CDRT1O95170 752 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 FAM157CP0CG43 387 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 PSG2P11465 335 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 CPT2P23786 658 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 BMXP51813 675 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 SNU13P55769 128 aaKnown RBP12.26□□□□□ -0.45
PNKP-221ENST00000627317 CHRFAM7AQ494W8 412 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 OR13F1Q8NGS4 319 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 OR10K1Q8NGX5 313 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 ANGPTL6Q8NI99 470 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 KCTD7Q96MP8 289 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 CCL13Q99616 98 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 DNTTIP1Q9H147 329 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 PLGRKTQ9HBL7 147 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 HMG20AQ9NP66 347 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 SCOCQ9UIL1 159 aa12.26□□□□□ -0.45
PNKP-221ENST00000627317 AK6Q9Y3D8 172 aaKnown RBP12.26□□□□□ -0.45
PNKP-221ENST00000627317 MALRD1Q5VYJ5 2156 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 IGKV1D-17A0A075B6S4 117 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 RFPL4AA6NLU0 287 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 RFPL4AL1F8VTS6 287 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 AIREO43918 545 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 HTR3BO95264 441 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 CSTBP04080 98 aaKnown RBP12.25□□□□□ -0.45
PNKP-221ENST00000627317 SFTPBP07988 381 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 WNT2P09544 360 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 CALCBP10092 127 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 MTNR1BP49286 362 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 PSMD7P51665 324 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 GNB2P62879 340 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 IL13RA1P78552 427 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 SLC22A6Q4U2R8 563 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 FAM120AOSQ5T036 256 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 GLIPR1L1Q6UWM5 242 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 C1QL2Q7Z5L3 287 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 GPR141Q7Z602 305 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 FAM216BQ8N7L0 139 aa12.25□□□□□ -0.45
PNKP-221ENST00000627317 LINC01356Q8N9X3 169 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms