RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 Q8N7P7 452 aa18.36■□□□□ 0.53
SF1-220ENST00000626028 OR5D14Q8NGL3 314 aa18.36■□□□□ 0.53
SF1-220ENST00000626028 SSMEM1Q8WWF3 244 aa18.36■□□□□ 0.53
SF1-220ENST00000626028 CYGBQ8WWM9 190 aa18.36■□□□□ 0.53
SF1-220ENST00000626028 OPALINQ96PE5 141 aa18.36■□□□□ 0.53
SF1-220ENST00000626028 VCXQ9H320 206 aa18.36■□□□□ 0.53
SF1-220ENST00000626028 hCG_1809904A0A1W2PP81 198 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 A0A1W2PPE2 198 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 A0A1W2PR64 198 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 A0A1W2PRV1 198 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 K7N7A8 449 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 TFF1P04155 84 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 TK1P04183 234 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 CAPZA1P52907 286 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 RPL31P62899 125 aaKnown RBP18.35■□□□□ 0.53
SF1-220ENST00000626028 ACSM1Q08AH1 577 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 MED21Q13503 144 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 RUSC1-AS1Q66K80 236 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 C16orf87Q6PH81 154 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 LDLRAD3Q86YD5 345 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 SERPINA12Q8IW75 414 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 OR51A4Q8NGJ6 313 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 DCLRE1BQ9H816 532 aa18.35■□□□□ 0.53
SF1-220ENST00000626028 DIMT1Q9UNQ2 313 aaKnown RBP18.35■□□□□ 0.53
SF1-220ENST00000626028 TRBV2A0A0J9YWF9 115 aa18.34■□□□□ 0.53
SF1-220ENST00000626028 HOXA3O43365 443 aaPredicted RBP18.34■□□□□ 0.53
SF1-220ENST00000626028 OCM2P0CE71 109 aa18.34■□□□□ 0.53
SF1-220ENST00000626028 OCMP0CE72 109 aaPredicted RBP18.34■□□□□ 0.53
SF1-220ENST00000626028 MYL12AP19105 171 aa18.34■□□□□ 0.53
SF1-220ENST00000626028 UBE2E1P51965 193 aa18.34■□□□□ 0.53
SF1-220ENST00000626028 SMN1Q16637 294 aaKnown RBP18.34■□□□□ 0.53
SF1-220ENST00000626028 SPIN3Q5JUX0 258 aa18.34■□□□□ 0.53
SF1-220ENST00000626028 RPL22L1Q6P5R6 122 aaKnown RBP18.34■□□□□ 0.53
SF1-220ENST00000626028 SAXO1Q8IYX7 474 aa18.34■□□□□ 0.53
SF1-220ENST00000626028 TNFRSF14Q92956 283 aa18.34■□□□□ 0.53
SF1-220ENST00000626028 SLAMF9Q96A28 289 aa18.34■□□□□ 0.53
SF1-220ENST00000626028 ZCCHC4Q9H5U6 513 aa18.34■□□□□ 0.53
SF1-220ENST00000626028 MDFIC2A0A1B0GVS7 189 aa18.33■□□□□ 0.52
SF1-220ENST00000626028 MELTFP08582 738 aa18.33■□□□□ 0.52
SF1-220ENST00000626028 CAPGP40121 348 aa18.33■□□□□ 0.52
SF1-220ENST00000626028 PDZK1IP1Q13113 114 aa18.33■□□□□ 0.52
SF1-220ENST00000626028 C3orf56Q8N813 242 aa18.33■□□□□ 0.52
SF1-220ENST00000626028 OR10AC1Q8NH08 325 aa18.33■□□□□ 0.52
SF1-220ENST00000626028 CNIH3Q8TBE1 160 aa18.33■□□□□ 0.52
SF1-220ENST00000626028 RPS4Y2Q8TD47 263 aa18.33■□□□□ 0.52
SF1-220ENST00000626028 CPNE2Q96FN4 548 aaPredicted RBP18.33■□□□□ 0.52
SF1-220ENST00000626028 DUX5Q96PT3 197 aa18.33■□□□□ 0.52
SF1-220ENST00000626028 SIRT7Q9NRC8 400 aa18.33■□□□□ 0.52
SF1-220ENST00000626028 OR14J1Q9UGF5 321 aa18.33■□□□□ 0.52
SF1-220ENST00000626028 EXOSC1Q9Y3B2 195 aaKnown RBP18.33■□□□□ 0.52
SF1-220ENST00000626028 FAM96BQ9Y3D0 163 aa18.33■□□□□ 0.52
SF1-220ENST00000626028 SOX21Q9Y651 276 aaPredicted RBP18.33■□□□□ 0.52
SF1-220ENST00000626028 RNASEK-C17orf49H0YIS7 233 aa18.32■□□□□ 0.52
SF1-220ENST00000626028 ZNF737O75373 536 aa18.32■□□□□ 0.52
SF1-220ENST00000626028 FBP1P09467 338 aa18.32■□□□□ 0.52
SF1-220ENST00000626028 ZNF146Q15072 292 aa18.32■□□□□ 0.52
SF1-220ENST00000626028 AWAT1Q58HT5 328 aa18.32■□□□□ 0.52
SF1-220ENST00000626028 C8orf59Q8N0T1 100 aaPredicted RBP18.32■□□□□ 0.52
SF1-220ENST00000626028 OR8H2Q8N162 312 aa18.32■□□□□ 0.52
SF1-220ENST00000626028 FAM58AQ8N1B3 248 aa18.32■□□□□ 0.52
SF1-220ENST00000626028 PIP4P2Q8N4L2 257 aa18.32■□□□□ 0.52
SF1-220ENST00000626028 DPAGT1Q9H3H5 408 aa18.32■□□□□ 0.52
SF1-220ENST00000626028 ELL3Q9HB65 397 aaPredicted RBP18.32■□□□□ 0.52
SF1-220ENST00000626028 C19orf12Q9NSK7 152 aa18.32■□□□□ 0.52
SF1-220ENST00000626028 GLS2Q9UI32 602 aa18.32■□□□□ 0.52
SF1-220ENST00000626028 DHDHQ9UQ10 334 aa18.32■□□□□ 0.52
SF1-220ENST00000626028 E9PI62 339 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 HAX1O00165 279 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 NPFFO15130 113 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 SULT1B1O43704 296 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 CLIC3O95833 236 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 RBP4P02753 201 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 CD2P06729 351 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 PIPP12273 146 aaPredicted RBP18.31■□□□□ 0.52
SF1-220ENST00000626028 CFPP27918 469 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 ETV1P50549 477 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 COL10A1Q03692 680 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 MIDNQ504T8 468 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 TMEM200BQ69YZ2 307 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 FAM185AQ8N0U4 392 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 ZSCAN4Q8NAM6 433 aaPredicted RBP18.31■□□□□ 0.52
SF1-220ENST00000626028 EMG1Q92979 244 aaKnown RBP18.31■□□□□ 0.52
SF1-220ENST00000626028 TMEM80Q96HE8 168 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 SNX22Q96L94 193 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 PDCD1LG2Q9BQ51 273 aa18.31■□□□□ 0.52
SF1-220ENST00000626028 CHCHD3Q9NX63 227 aaKnown RBP18.31■□□□□ 0.52
SF1-220ENST00000626028 CNOT2Q9NZN8 540 aaKnown RBP18.31■□□□□ 0.52
SF1-220ENST00000626028 SF3B6Q9Y3B4 125 aaKnown RBP18.31■□□□□ 0.52
SF1-220ENST00000626028 A0A0U1RQK1 487 aa18.3■□□□□ 0.52
SF1-220ENST00000626028 EFCAB10A6NFE3 127 aa18.3■□□□□ 0.52
SF1-220ENST00000626028 F8VVB4 439 aa18.3■□□□□ 0.52
SF1-220ENST00000626028 F8VWA3 439 aa18.3■□□□□ 0.52
SF1-220ENST00000626028 IER3P46695 156 aa18.3■□□□□ 0.52
SF1-220ENST00000626028 CEBPDP49716 269 aaPredicted RBP18.3■□□□□ 0.52
SF1-220ENST00000626028 MEF2CQ06413 473 aaPredicted RBP18.3■□□□□ 0.52
SF1-220ENST00000626028 CDK5R1Q15078 307 aa18.3■□□□□ 0.52
SF1-220ENST00000626028 GDPD3Q7L5L3 318 aa18.3■□□□□ 0.52
SF1-220ENST00000626028 ASCC1Q8N9N2 400 aaKnown RBP18.3■□□□□ 0.52
SF1-220ENST00000626028 OR13C9Q8NGT0 318 aa18.3■□□□□ 0.52
SF1-220ENST00000626028 OR52N1Q8NH53 320 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms