RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 TRAV30A0A087WSZ9 112 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 PPP1R2P9O14990 202 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 STHQ8IWL8 128 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 OR2G3Q8NGZ4 309 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 UBR2Q8IWV8 1755 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 hCG_38984A0A1B0GV85 526 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 TOXO94900 526 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 SPDEFO95238 335 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 CFDP00746 253 aaPredicted RBP5.61□□□□□ -1.51
CDKL5-205ENST00000623535 RAF1P04049 648 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 ADRA2AP08913 450 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 FAM3AP98173 230 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 FAM156AQ8NDB6 213 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 RMI2Q96E14 147 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 COL25A1Q9BXS0 654 aaPredicted RBP5.61□□□□□ -1.51
CDKL5-205ENST00000623535 GPR84Q9NQS5 396 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 MON2Q7Z3U7 1717 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 CREBBPQ92793 2442 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 AGPAT2O15120 278 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 GFERP55789 205 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 RPL31P62899 125 aaKnown RBP5.61□□□□□ -1.51
CDKL5-205ENST00000623535 MRPS11P82912 194 aaKnown RBP5.61□□□□□ -1.51
CDKL5-205ENST00000623535 PROX2Q3B8N5 592 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 ITLN2Q8WWU7 325 aaPredicted RBP5.61□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF768Q9H5H4 540 aaKnown RBP5.61□□□□□ -1.51
CDKL5-205ENST00000623535 MEIS3P2A8K0S8 358 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 RIGQ13278 110 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 SPINK14Q6IE38 97 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 MOGAT3Q86VF5 341 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF547Q8IVP9 402 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 GEMIN7Q9H840 131 aaKnown RBP5.61□□□□□ -1.51
CDKL5-205ENST00000623535 NXPH3O95157 252 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 CR2P20023 1033 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 RANP62826 216 aaKnown RBP5.61□□□□□ -1.51
CDKL5-205ENST00000623535 UNQ5815/PRO19632Q6UWF5 114 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 CYHR1Q6ZMK1 362 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF516Q92618 1163 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 WDR89Q96FK6 387 aaPredicted RBP5.61□□□□□ -1.51
CDKL5-205ENST00000623535 A0A1B0GTH9 108 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 PRSS37A4D1T9 235 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 OR4C46A6NHA9 309 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 FBXO24O75426 580 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 CTSLP07711 333 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF142P52746 1687 aaPredicted RBP5.61□□□□□ -1.51
CDKL5-205ENST00000623535 OR1L3Q8NH93 324 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 SFT2D1Q8WV19 159 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 OIT3Q8WWZ8 545 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 METTL17Q9H7H0 456 aaPredicted RBP5.61□□□□□ -1.51
CDKL5-205ENST00000623535 ATP6V1G2-DDX39BF2Z307 99 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 G3V3Q6 166 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 RHBDL1O75783 438 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 GYPBP06028 91 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 PMS2CLQ68D20 193 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 RHOUQ7L0Q8 258 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 MOGAT1Q96PD6 335 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 SF3B5Q9BWJ5 86 aaKnown RBP5.61□□□□□ -1.51
CDKL5-205ENST00000623535 PRNDQ9UKY0 176 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 MTCH2Q9Y6C9 303 aa5.61□□□□□ -1.51
CDKL5-205ENST00000623535 IGSF23A1L1A6 192 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 TFAP2AP05549 437 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 PCSK6P29122 969 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 CEACAM6P40199 344 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 NHLH1Q02575 133 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 NHLH2Q02577 135 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 EGR3Q06889 387 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 MGAT3Q09327 533 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 SMRP1Q8NCR6 262 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 OR4B1Q8NGF8 309 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 DTD1Q8TEA8 209 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 EMC6Q9BV81 110 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 ADAM10O14672 748 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 IL7P13232 177 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF17P17021 662 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 CA6P23280 308 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 PLPPR2Q96GM1 343 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 FBXO8Q9NRD0 319 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 LYRM2Q9NU23 88 aaPredicted RBP5.6□□□□□ -1.51
CDKL5-205ENST00000623535 J3KRW8 73 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 NSUN5P1Q3KNT7 163 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 ZNF300Q96RE9 604 aaPredicted RBP5.6□□□□□ -1.51
CDKL5-205ENST00000623535 REPIN1Q9BWE0 567 aaKnown RBP5.6□□□□□ -1.51
CDKL5-205ENST00000623535 SNRPGP15A8MWD9 76 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 NEURL1O76050 574 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 PDGFBP01127 241 aaPredicted RBP5.6□□□□□ -1.51
CDKL5-205ENST00000623535 SMIM18P0DKX4 95 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 EBPQ15125 230 aaKnown RBP5.6□□□□□ -1.51
CDKL5-205ENST00000623535 LY6EQ16553 131 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 OTUD1Q5VV17 481 aaPredicted RBP5.6□□□□□ -1.51
CDKL5-205ENST00000623535 VAMP3Q15836 100 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 C20orf204Q6ZNR8 217 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 KIR3DL3Q8N743 410 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 CMBLQ96DG6 245 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 FZD6O60353 706 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 FUT3P21217 361 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 DUSP5Q16690 384 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 MEIG1Q5JSS6 88 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 CLEC17AQ6ZS10 378 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 SH2D5Q6ZV89 423 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 SVBPQ8N300 66 aa5.6□□□□□ -1.51
CDKL5-205ENST00000623535 KLHDC1Q8N7A1 406 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms