RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 MPZP25189 248 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 COL10A1Q03692 680 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 BLMHQ13867 455 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 UBE2V2Q15819 145 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 C2orf68Q2NKX9 166 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 DNAL1Q4LDG9 190 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 FBLN7Q53RD9 439 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 Q6ZS46 218 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 RNF144BQ7Z419 303 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 AMIGO2Q86SJ2 522 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 TMEM219Q86XT9 240 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 PRSS35Q8N3Z0 413 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 OR5D13Q8NGL4 314 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 OR2T27Q8NH04 317 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 TMEM163Q8TC26 289 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 ASB17Q8WXJ9 295 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 SLAMF9Q96A28 289 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 NRBF2Q96F24 287 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 ZNF702PQ9H963 129 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 KRT84Q9NSB2 600 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 CLN6Q9NWW5 311 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 RASL12Q9NYN1 266 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 MTCH1Q9NZJ7 389 aa9.25□□□□□ -0.93
CPNE3-210ENST00000621245 SF3B6Q9Y3B4 125 aaKnown RBP9.25□□□□□ -0.93
CPNE3-210ENST00000621245 FAM230AA0A1W2PPH8 454 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 TMEM82A0PJX8 343 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 ODF3BA8MYP8 253 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 SLC1A7O00341 560 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 DLGAP1O14490 977 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 ZNF737O75373 536 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 CSF1P09603 554 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 CALCBP10092 127 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 CCL1P22362 96 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 KIR3DL2P43630 455 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 HERPUD1Q15011 391 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 ATP6AP1Q15904 470 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 BEAN1Q3B7T3 259 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 TMEM95Q3KNT9 176 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 NXNL2Q5VZ03 156 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 KDM4DQ6B0I6 523 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 BAIAP2L2Q6UXY1 529 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 CATSPERDQ86XM0 798 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 ZNF573Q86YE8 665 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 THNSL2Q86YJ6 484 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 ZNF561Q8N587 486 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 TPRX1Q8N7U7 411 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 CFHR4Q92496 578 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 NKX3-1Q99801 234 aaPredicted RBP9.24□□□□□ -0.93
CPNE3-210ENST00000621245 CIB1Q99828 191 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 GABARAPL1Q9H0R8 117 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 MOB1AQ9H8S9 216 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 TMEM14AQ9Y6G1 99 aa9.24□□□□□ -0.93
CPNE3-210ENST00000621245 DYNC2H1Q8NCM8 4307 aaKnown RBP9.23□□□□□ -0.93
CPNE3-210ENST00000621245 A0A1W2PQL4 384 aaPredicted RBP9.23□□□□□ -0.93
CPNE3-210ENST00000621245 FAM90A8PA6NJQ4 464 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 C17orf98A8MV24 154 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 ZNF670-ZNF695F2Z2N8 137 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 IGHA1P01876 353 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 VSIG10L2P0DP72 767 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 CD28P10747 220 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 KIR2DS4P43632 304 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 NPBWR2P48146 333 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 LCE2CQ5TA81 110 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 RDH10Q8IZV5 341 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 YIPF7Q8N8F6 280 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 ASCC1Q8N9N2 400 aaKnown RBP9.23□□□□□ -0.93
CPNE3-210ENST00000621245 OR4C13Q8NGP0 309 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 DNAJC9Q8WXX5 260 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 SERTAD4Q9NUC0 356 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 FAM53CQ9NYF3 392 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 USE1Q9NZ43 259 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 SNX5Q9Y5X3 404 aa9.23□□□□□ -0.93
CPNE3-210ENST00000621245 LOC107986453A0A1B0GWG9 222 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 A6NDX4 124 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 G3V2T6 193 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 K7N7A8 449 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 MMP23AO75900 390 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 ARG1P05089 322 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 DUSP1P28562 367 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 SNU13P55769 128 aaKnown RBP9.22□□□□□ -0.93
CPNE3-210ENST00000621245 ZNF85Q03923 595 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 IL24Q13007 206 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 EDDM3AQ14507 147 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 TP53I3Q53FA7 332 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 OR52N4Q8NGI2 321 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 BCAS4Q8TDM0 211 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 WIPF2Q8TF74 440 aaPredicted RBP9.22□□□□□ -0.93
CPNE3-210ENST00000621245 TEX12Q9BXU0 123 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 PKIBQ9C010 78 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 CHST6Q9GZX3 395 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 RBFOX1Q9NWB1 397 aaKnown RBP9.22□□□□□ -0.93
CPNE3-210ENST00000621245 POLDIP2Q9Y2S7 368 aa9.22□□□□□ -0.93
CPNE3-210ENST00000621245 IGKV1-9A0A0C4DH69 117 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 A0A0G2JK05 382 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 FAM229AH3BQW9 127 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 BCL3P20749 454 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 HTR1FP30939 366 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 EDDM3BP56851 147 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 ISL1P61371 349 aa9.21□□□□□ -0.94
CPNE3-210ENST00000621245 FAM189A2Q15884 450 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms