RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 SP6Q3SY56 376 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 C9orf40Q8IXQ3 194 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 SLC22A18ASQ8N1D0 253 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 LY86O95711 162 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 CDC20Q12834 499 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 CLEC2AQ6UVW9 174 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 UCN2Q96RP3 112 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 PLSCR3Q9NRY6 295 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 PILRBQ9UKJ0 227 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 COL24A1Q17RW2 1714 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 IGHV3OR15-7A0A075B7D8 119 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 UMAD1C9J7I0 102 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 PDCD6O75340 191 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 LALBAP00709 142 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 ANKRD34CP0C6C1 535 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 PEBP1P30086 187 aaKnown RBP10.06□□□□□ -0.8
CLIP1-219ENST00000620786 OR5H6Q8NGV6 325 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 BCL2L2Q92843 193 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-219ENST00000620786 HGDQ93099 445 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 OR51I2Q9H344 312 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 EXOGQ9Y2C4 368 aaKnown RBP10.06□□□□□ -0.8
CLIP1-219ENST00000620786 DCTN6O00399 190 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 PSG6Q00889 435 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 SLC25A30Q5SVS4 291 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 INO80CQ6PI98 192 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-219ENST00000620786 OR5AP2Q8NGF4 316 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 OPN3Q9H1Y3 402 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-219ENST00000620786 MRPL22Q9NWU5 206 aaKnown RBP10.06□□□□□ -0.8
CLIP1-219ENST00000620786 GON4LQ3T8J9 2241 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 IGHV1-45A0A0A0MS14 117 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 A0A1B0GUH1 482 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 A0A1W2PPV9 198 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 CD96P40200 585 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 TMEM128Q5BJH2 165 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 ZNF574Q6ZN55 896 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-219ENST00000620786 ATG4DQ86TL0 474 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-219ENST00000620786 ARRDC1Q8N5I2 433 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 SLC25A40Q8TBP6 338 aa10.06□□□□□ -0.8
CLIP1-219ENST00000620786 RBPMSQ93062 196 aaKnown RBP10.06□□□□□ -0.8
CLIP1-219ENST00000620786 MS4A7Q9GZW8 240 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-219ENST00000620786 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-219ENST00000620786 MARF1Q9Y4F3 1742 aaKnown RBP10.06□□□□□ -0.8
CLIP1-219ENST00000620786 C3orf85A0A1B0GTC6 90 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 PPP5D1E7EU14 171 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 PCMT1P22061 227 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 LYZP61626 148 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 MRPS11P82912 194 aaKnown RBP10.05□□□□□ -0.8
CLIP1-219ENST00000620786 ZNF260Q3ZCT1 412 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 AVPI1Q5T686 147 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 OR52L2PQ8NGH6 319 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 OR5R1Q8NH85 324 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 RXFP4Q8TDU9 374 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 ZCCHC14Q8WYQ9 949 aaKnown RBP10.05□□□□□ -0.8
CLIP1-219ENST00000620786 FAM103A1Q9BTL3 118 aaKnown RBP10.05□□□□□ -0.8
CLIP1-219ENST00000620786 RSRP1Q9BUV0 290 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 OOEPA6NGQ2 149 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 CST7O76096 145 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 SPP1P10451 314 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 GPR6P46095 362 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-219ENST00000620786 ZNF239Q16600 458 aaKnown RBP10.05□□□□□ -0.8
CLIP1-219ENST00000620786 FNDC7Q5VTL7 733 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 FBXW9Q5XUX1 488 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 ZNF501Q96CX3 271 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-219ENST00000620786 SLC17A5Q9NRA2 495 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 LANCL1O43813 399 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 OR2C1O95371 312 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 SLC25A5P05141 298 aaKnown RBP10.05□□□□□ -0.8
CLIP1-219ENST00000620786 HLXQ14774 488 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-219ENST00000620786 MESTQ5EB52 335 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 C1QL3Q5VWW1 255 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 ZNF721Q8TF20 911 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 BLNKQ8WV28 456 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 PIGMQ9H3S5 423 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 SIRT5Q9NXA8 310 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 SNRPGP15A8MWD9 76 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 SOX15O60248 233 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 GGTLC2Q14390 218 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 MDP1Q86V88 176 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 SPICQ8N5J4 248 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 PCGF1Q9BSM1 259 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 CNTD2Q9H8S5 307 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 PRRC2BQ5JSZ5 2229 aaKnown RBP10.05□□□□□ -0.8
CLIP1-219ENST00000620786 CDIPTO14735 213 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 MMP15P51511 669 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 DYNC2LI1Q8TCX1 351 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 C1RLQ9NZP8 487 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 FLRT3Q9NZU0 649 aa10.05□□□□□ -0.8
CLIP1-219ENST00000620786 F5H697 171 aa10.04□□□□□ -0.8
CLIP1-219ENST00000620786 FOXL2P58012 376 aa10.04□□□□□ -0.8
CLIP1-219ENST00000620786 LSM6P62312 80 aaKnown RBP10.04□□□□□ -0.8
CLIP1-219ENST00000620786 TAGLNQ01995 201 aaKnown RBP10.04□□□□□ -0.8
CLIP1-219ENST00000620786 MRM1Q6IN84 353 aaKnown RBP10.04□□□□□ -0.8
CLIP1-219ENST00000620786 THSD4Q6ZMP0 1018 aa10.04□□□□□ -0.8
CLIP1-219ENST00000620786 MSRB3Q8IXL7 192 aa10.04□□□□□ -0.8
CLIP1-219ENST00000620786 LILRB4Q8NHJ6 448 aa10.04□□□□□ -0.8
CLIP1-219ENST00000620786 DYNLRB2Q8TF09 96 aa10.04□□□□□ -0.8
CLIP1-219ENST00000620786 SMIM7Q9BQ49 75 aa10.04□□□□□ -0.8
CLIP1-219ENST00000620786 UQCC1Q9NVA1 299 aa10.04□□□□□ -0.8
CLIP1-219ENST00000620786 BOLA1Q9Y3E2 137 aa10.04□□□□□ -0.8
CLIP1-219ENST00000620786 SEMA7AO75326 666 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms