RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 H7C417 338 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 IFNL4K9M1U5 179 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 AKR7A2O43488 359 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 CDC14BO60729 498 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 TPPPO94811 219 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 EIF4EP06730 217 aaKnown RBP6.76□□□□□ -1.33
CPNE3-209ENST00000620393 MGMTP16455 207 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 COL8A2P25067 703 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 ETV6P41212 452 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 PITPNBP48739 271 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 FGF12P61328 243 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 RPS27AP62979 156 aaKnown RBP6.76□□□□□ -1.33
CPNE3-209ENST00000620393 NHLRC3Q5JS37 347 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 METAP1DQ6UB28 335 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-209ENST00000620393 BIVMQ86UB2 503 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 CCDC190Q86UF4 302 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 LAX1Q8IWV1 398 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 FAM58AQ8N1B3 248 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 LRRC29Q8WV35 223 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 FAM46BQ96A09 425 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 DIRAS2Q96HU8 199 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 ZNF488Q96MN9 340 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 TMEM59Q9BXS4 323 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 SELENOIQ9C0D9 397 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 LPAR5Q9H1C0 372 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 ATG5Q9H1Y0 275 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 HES4Q9HCC6 221 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 HMG20AQ9NP66 347 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 DIABLOQ9NR28 239 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 RBFOX1Q9NWB1 397 aaKnown RBP6.76□□□□□ -1.33
CPNE3-209ENST00000620393 ST3GAL6Q9Y274 331 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 LRRK2Q5S007 2527 aa6.76□□□□□ -1.33
CPNE3-209ENST00000620393 PKDREJQ9NTG1 2253 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 A0A0A6YYD4 124 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 IGHV1-69-2A0A0G2JMI3 117 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A10PA6NDY2 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A18PA6NE21 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A16PA6NEW6 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FABP12A6NFH5 140 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A20PA6NIJ5 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A8PA6NJQ4 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A7PA6NKC0 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 LRRC30A6NM36 301 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A22PA8MWA6 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A12PA8MX19 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A5PA8MXJ8 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A23PA8MXZ1 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 SRRM5B3KS81 715 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 TMEM178BH3BS89 294 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 H3BUI4 141 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 RAB27BO00194 218 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 WNT9BO14905 357 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 XRCC3O43542 346 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 SCGNO76038 276 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 NXPH2O95156 264 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 INHBBP09529 407 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A15PP0C7V4 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A13PP0C7W8 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A14PP0C7W9 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A24PP0C7X0 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 IRF2P14316 349 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 PRKACAP17612 351 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 GLRA1P23415 457 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 TALDO1P37837 337 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 VEGFCP49767 419 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 TMEM50BP56557 158 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 MRPS11P82912 194 aaKnown RBP6.75□□□□□ -1.33
CPNE3-209ENST00000620393 ZNF45Q02386 682 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 TAF9Q16594 264 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 RAB12Q6IQ22 244 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 CNIH2Q6PI25 160 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 ACP7Q6ZNF0 438 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 FAM90A1Q86YD7 464 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 TGIF2LYQ8IUE0 185 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 BATF2Q8N1L9 274 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 GCSAMQ8N6F7 178 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 OR4M1Q8NGD0 313 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 OR56B1Q8NGI3 324 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 S100ZQ8WXG8 99 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 CCL17Q92583 94 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 RDH5Q92781 318 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 EMG1Q92979 244 aaKnown RBP6.75□□□□□ -1.33
CPNE3-209ENST00000620393 PHF21AQ96BD5 680 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 Q96M66 194 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 TSC22D3Q99576 134 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 GAL3ST1Q99999 423 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 NUDT16L1Q9BRJ7 211 aaKnown RBP6.75□□□□□ -1.33
CPNE3-209ENST00000620393 WDR13Q9H1Z4 485 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 SEBOXQ9HB31 216 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-209ENST00000620393 DLL4Q9NR61 685 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 TMEM106BQ9NUM4 274 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 TREM2Q9NZC2 230 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 RABL2AQ9UBK7 228 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-209ENST00000620393 EXTL2Q9UBQ6 330 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 RABL2BQ9UNT1 228 aa6.75□□□□□ -1.33
CPNE3-209ENST00000620393 TRAV18A0A075B6X5 111 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 FOXI3A8MTJ6 420 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-209ENST00000620393 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-209ENST00000620393 SH2D1BO14796 132 aa6.74□□□□□ -1.33
CPNE3-209ENST00000620393 GEMIN2O14893 280 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms