RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ZNF718Q3SXZ3 478 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 SPRNQ5BIV9 151 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 TMEM69Q5SWH9 247 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 C6orf183Q5T699 404 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 BCL2L15Q5TBC7 163 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 DMRTA1Q5VZB9 504 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 MBNL2Q5VZF2 373 aaKnown RBP4.47□□□□□ -1.69
SHMT1-211ENST00000618902 FAHD2BQ6P2I3 314 aaPredicted RBP4.47□□□□□ -1.69
SHMT1-211ENST00000618902 TMEM65Q6PI78 240 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 BRICD5Q6PL45 260 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 CLEC9AQ6UXN8 241 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 COLCA1Q6ZS62 124 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 NR2C2APQ86WQ0 139 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 CMTM4Q8IZR5 234 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 EIF4E3Q8N5X7 224 aaKnown RBP4.47□□□□□ -1.69
SHMT1-211ENST00000618902 OR6N2Q8NGY6 317 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 OTOSQ8NHW6 89 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 SLC25A40Q8TBP6 338 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 RNF133Q8WVZ7 376 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 PPP1R14AQ96A00 147 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 SLAMF6Q96DU3 332 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 FAHD2AQ96GK7 314 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 C4orf45Q96LM5 186 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 SYT3Q9BQG1 590 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 SOX7Q9BT81 388 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 TTTY10Q9BZA0 68 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 OR2J1Q9GZK6 312 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 EGLN1Q9GZT9 426 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 OPA3Q9H6K4 179 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 CHODLQ9H9P2 273 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 CDH20Q9HBT6 801 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 HRASLSQ9HDD0 168 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 NOX4Q9NPH5 578 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 STEAP1Q9UHE8 339 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 LAMP5Q9UJQ1 280 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 GNG8Q9UK08 70 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 CDC42EP3Q9UKI2 254 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 MRPS7Q9Y2R9 242 aaKnown RBP4.47□□□□□ -1.69
SHMT1-211ENST00000618902 CUBNO60494 3623 aa4.47□□□□□ -1.69
SHMT1-211ENST00000618902 TRBV5-7A0A0A0MS05 114 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 A0A0D9SG52 128 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 PLSCR5A0PG75 271 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ANXA2P2A6NMY6 339 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 NUDT19A8MXV4 375 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 LEUTXA8MZ59 168 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 E9PI62 339 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 F5H5K5 113 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 M0R135 149 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 CD5LO43866 347 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 SRSF10O75494 262 aaKnown RBP4.46□□□□□ -1.7
SHMT1-211ENST00000618902 NCR1O76036 304 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 LY6HO94772 140 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ZFPL1O95159 310 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ABHD16AO95870 558 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 PNPP00491 289 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 IGHV4-39P01824 125 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ISG15P05161 165 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ANXA2P07355 339 aaKnown RBP4.46□□□□□ -1.7
SHMT1-211ENST00000618902 AKAIN1P0CW23 69 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 RRASP10301 218 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 SELEP16581 610 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 HLA-GP17693 338 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 RAB6AP20340 208 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ACHEP22303 614 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 USF1P22415 310 aaPredicted RBP4.46□□□□□ -1.7
SHMT1-211ENST00000618902 TNFSF4P23510 183 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 GATA3P23771 443 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 MPZP25189 248 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 GCH1P30793 250 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 PRSS3P35030 304 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ALDH3B1P43353 468 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 TAS2R19P59542 299 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 PSMA6P60900 246 aaKnown RBP4.46□□□□□ -1.7
SHMT1-211ENST00000618902 PPP1CBP62140 327 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 CYCSP99999 105 aaKnown RBP4.46□□□□□ -1.7
SHMT1-211ENST00000618902 SRSF4Q08170 494 aaKnown RBP4.46□□□□□ -1.7
SHMT1-211ENST00000618902 MZT1Q08AG7 82 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 PSG7Q13046 419 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 MEF2DQ14814 521 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ARL6IP1Q15041 203 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 LGALSLQ3ZCW2 172 aaPredicted RBP4.46□□□□□ -1.7
SHMT1-211ENST00000618902 TP53I3Q53FA7 332 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 Q5BKY6 102 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 TMEM244Q5VVB8 128 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 LIPNQ5VXI9 398 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF626Q68DY1 528 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 SIGIRRQ6IA17 410 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 LIN54Q6MZP7 749 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 RGS7BPQ6MZT1 257 aaPredicted RBP4.46□□□□□ -1.7
SHMT1-211ENST00000618902 Q6ZR03 302 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF679Q8IYX0 411 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 OR8H3Q8N146 312 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 NKAIN3Q8N8D7 197 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 TMEM229BQ8NBD8 167 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 PLPP7Q8NBV4 271 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 CCDC54Q8NEL0 328 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 DNAAF1Q8NEP3 725 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 OR11H7Q8NGC8 314 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 OR1J1Q8NGS3 322 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 OR5H6Q8NGV6 325 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms