RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 SLC19A3Q9BZV2 496 aa1.37□□□□□ -2.19
TARDBP-220ENST00000618606 FBXL15Q9H469 300 aa1.37□□□□□ -2.19
TARDBP-220ENST00000618606 PLEKHF2Q9H8W4 249 aa1.37□□□□□ -2.19
TARDBP-220ENST00000618606 RDH14Q9HBH5 336 aa1.37□□□□□ -2.19
TARDBP-220ENST00000618606 SND1-IT1Q9HBX3 110 aa1.37□□□□□ -2.19
TARDBP-220ENST00000618606 ASCL3Q9NQ33 180 aa1.37□□□□□ -2.19
TARDBP-220ENST00000618606 LHX9Q9NQ69 397 aa1.37□□□□□ -2.19
TARDBP-220ENST00000618606 DDX19AQ9NUU7 478 aaKnown RBP1.37□□□□□ -2.19
TARDBP-220ENST00000618606 FBXL3Q9UKT7 428 aa1.37□□□□□ -2.19
TARDBP-220ENST00000618606 ITGB4P16144 1822 aa1.37□□□□□ -2.19
TARDBP-220ENST00000618606 BRCA1P38398 1863 aaKnown RBP1.37□□□□□ -2.19
TARDBP-220ENST00000618606 ELP1O95163 1332 aa1.37□□□□□ -2.19
TARDBP-220ENST00000618606 IGSF9BQ9UPX0 1349 aa1.37□□□□□ -2.19
TARDBP-220ENST00000618606 LOC102724200A0A096LPH7 203 aaPredicted RBP1.36□□□□□ -2.19
TARDBP-220ENST00000618606 TMEM223A0PJW6 202 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 TMEM150BA6NC51 233 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 H3BP45 60 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 BPY2O14599 106 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 TAAR5O14804 337 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 CHST10O43529 356 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 NIPSNAP2O75323 286 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 SNAP29O95721 258 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 IGHV3-11P01762 117 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 HLA-DQB1P01920 261 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 PET100P0DJ07 73 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 CD28P10747 220 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 ZNF3P17036 446 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 TAC1P20366 129 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 ME2P23368 584 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 PSMB5P28074 263 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 GRPRP30550 384 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 LGALS7P47929 136 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 CDC34P49427 236 aaPredicted RBP1.36□□□□□ -2.19
TARDBP-220ENST00000618606 PSMB2P49721 201 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 EMP2P54851 167 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 CLDN12P56749 244 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 RPL10AP62906 217 aaKnown RBP1.36□□□□□ -2.19
TARDBP-220ENST00000618606 ELF3P78545 371 aaPredicted RBP1.36□□□□□ -2.19
TARDBP-220ENST00000618606 KDSRQ06136 332 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 ADIGQ0VDE8 80 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 BNIP2Q12982 314 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 DMC1Q14565 340 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 MAPRE2Q15555 327 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 HSP90B2PQ58FF3 399 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 RBM48Q5RL73 367 aaKnown RBP1.36□□□□□ -2.19
TARDBP-220ENST00000618606 ZNF684Q5T5D7 378 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 IDNKQ5T6J7 187 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 MFSD14CQ5VZR4 134 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 XKRXQ6PP77 449 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 USP50Q70EL3 339 aaPredicted RBP1.36□□□□□ -2.19
TARDBP-220ENST00000618606 MRPL52Q86TS9 123 aaKnown RBP1.36□□□□□ -2.19
TARDBP-220ENST00000618606 PLCZ1Q86YW0 608 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 BLIDQ8IZY5 108 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 OR5T1Q8NG75 326 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 OR2M7Q8NG81 312 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 OR4M2Q8NGB6 313 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 OR51Q1Q8NH59 317 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 OR1L1Q8NH94 360 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 ZNF420Q8TAQ5 688 aaPredicted RBP1.36□□□□□ -2.19
TARDBP-220ENST00000618606 CCL17Q92583 94 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 EXOSC8Q96B26 276 aaKnown RBP1.36□□□□□ -2.19
TARDBP-220ENST00000618606 LRRC45Q96CN5 670 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 FXYD5Q96DB9 178 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 MRAP2Q96G30 205 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 SNF8Q96H20 258 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 NARS2Q96I59 477 aaKnown RBP1.36□□□□□ -2.19
TARDBP-220ENST00000618606 ARL5BQ96KC2 179 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 SMIM8Q96KF7 97 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 RSG1Q9BU20 258 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 TAPBPLQ9BX59 468 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 ING2Q9H160 280 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 LHX5Q9H2C1 402 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 MFSD1Q9H3U5 465 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 ASB7Q9H672 318 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 WDR54Q9H977 334 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 PARVGQ9HBI0 331 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 ZNF355PQ9NSJ1 428 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 C1orf109Q9NX04 203 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 DNAJC27Q9NZQ0 273 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 ZNRD1Q9P1U0 126 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 KLF13Q9Y2Y9 288 aaPredicted RBP1.36□□□□□ -2.19
TARDBP-220ENST00000618606 USH1CQ9Y6N9 552 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 LRP4O75096 1905 aa1.36□□□□□ -2.19
TARDBP-220ENST00000618606 IGHV3-49A0A0A0MS15 119 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 IGKV1-6A0A0C4DH72 117 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 IGHV7-4-1A0A0J9YVY3 117 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 LOC389332A0A1B0GUA5 103 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 GOLGA8IPA6NC78 632 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 FFAR1O14842 300 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 TOX3O15405 576 aaPredicted RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 FABP7O15540 132 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 EIF1BO60739 113 aaKnown RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 MED6O75586 246 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 CCNKO75909 580 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 CTDNEP1O95476 244 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 RAB36O95755 333 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 ASS1P00966 412 aaKnown RBP1.35□□□□□ -2.19
TARDBP-220ENST00000618606 IGKV1-39P01597 117 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 IGKV1D-39P04432 117 aa1.35□□□□□ -2.19
TARDBP-220ENST00000618606 SEC11BP0C7V7 166 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms