RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 C16orf82Q7Z2V1 217 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 RNF175Q8N4F7 328 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 ZNF775Q96BV0 537 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-211ENST00000615798 WDR92Q96MX6 357 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 CDCA4Q9BXL8 241 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 GBF1Q92538 1859 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 SNURFLB1AK76 121 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 MS4A18H0YCH9 400 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 YBX1P67809 324 aaKnown RBP8.35□□□□□ -1.07
COL12A1-211ENST00000615798 MS4A18Q3C1V0 323 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 ANKRD55Q3KP44 614 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 JMJD6Q6NYC1 403 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-211ENST00000615798 RBM45Q8IUH3 476 aaKnown RBP8.35□□□□□ -1.07
COL12A1-211ENST00000615798 KCNMB2Q9Y691 235 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 HRH1P35367 487 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 FER1L6-AS2Q96M78 137 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 AQP10Q96PS8 301 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 NEU1Q99519 415 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 USP22Q9UPT9 525 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 TNFRSF1BP20333 461 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 FOXA1P55317 472 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 SMIM21Q3B7S5 101 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 RBPMS2Q6ZRY4 209 aaKnown RBP8.35□□□□□ -1.07
COL12A1-211ENST00000615798 CA13Q8N1Q1 262 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 WDR83Q9BRX9 315 aaKnown RBP8.35□□□□□ -1.07
COL12A1-211ENST00000615798 FCMRO60667 390 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 IGHV4-34P06331 123 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 SEC11BP0C7V7 166 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 HOXA6P31267 233 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 TPBGQ13641 420 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 SURF2Q15527 256 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM106AQ96A25 262 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 DEFB126Q9BYW3 111 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 RBBP6Q7Z6E9 1792 aaKnown RBP8.35□□□□□ -1.07
COL12A1-211ENST00000615798 CDC14CA4D256 554 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 CER1O95813 267 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 ASB10Q8WXI3 467 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 SFXN1Q9H9B4 322 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 PLAGL1Q9UM63 463 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 PIGLQ9Y2B2 252 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 TRAV27A0A087WT01 109 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 HOXD9P28356 352 aaPredicted RBP8.35□□□□□ -1.07
COL12A1-211ENST00000615798 ELFN2Q5R3F8 820 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 GLIPR1L1Q6UWM5 242 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 HSF4Q9ULV5 492 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 GHRHP01286 108 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 MYOGP15173 224 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 LDLRAD2Q5SZI1 272 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 ZNF841Q6ZN19 808 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM229BQ8NBD8 167 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 NUBPLQ8TB37 319 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 FBXO17Q96EF6 278 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 FBXL12Q9NXK8 326 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 CHST1O43916 411 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 HTR6P50406 440 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 B4GALNT1Q00973 533 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 FOXC2Q99958 501 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 A4GALTQ9NPC4 353 aa8.35□□□□□ -1.07
COL12A1-211ENST00000615798 THSD7AQ9UPZ6 1657 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 TSPAN31Q12999 210 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 ERV3-1Q14264 604 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 PNLIPRP3Q17RR3 467 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 ISOC2Q96AB3 205 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 GALMQ96C23 342 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 C11orf94C9JXX5 98 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 GJB5O95377 273 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 OR10AD1Q8NGE0 317 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 NEURL3Q96EH8 262 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 MAP1LC3AQ9H492 121 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM128Q5BJH2 165 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 BARHL1Q9BZE3 327 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 SOD1P00441 154 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 PLPP1O14494 284 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 ESDP10768 282 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 PRF1P14222 555 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 RAG2P55895 527 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 VWA2Q5GFL6 755 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 DEGS2Q6QHC5 323 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 CALHM3Q86XJ0 350 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 APIPQ96GX9 242 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 TOX2Q96NM4 488 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 RARRES2Q99969 163 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 NEURL2Q9BR09 285 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 ANKRD36A6QL64 1941 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 LY75O60449 1722 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 CACNG5Q9UF02 275 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 RAXQ9Y2V3 346 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM184BQ9Y519 407 aaPredicted RBP8.34□□□□□ -1.07
COL12A1-211ENST00000615798 PTGDR2Q9Y5Y4 395 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 CACNG7P62955 275 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 NXNL2Q5VZ03 156 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 CD99L2Q8TCZ2 262 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 MAGT1Q9H0U3 335 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 LRRC30A6NM36 301 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 TIMM8AO60220 97 aaPredicted RBP8.34□□□□□ -1.07
COL12A1-211ENST00000615798 SLC38A11Q08AI6 406 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 PIANPQ8IYJ0 282 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 VKORC1L1Q8N0U8 176 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 KCNE4Q8WWG9 221 aa8.34□□□□□ -1.07
COL12A1-211ENST00000615798 HTR5AP47898 357 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms