RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 PSENENQ9NZ42 101 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 A0A1W2PNV4 684 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 TMEM127O75204 238 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 CST7O76096 145 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 GNG10P50151 68 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 RAB4BP61018 213 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF92Q03936 586 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 SLC25A47Q6Q0C1 308 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 TMEM123Q8N131 208 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 TMEM104Q8NE00 496 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 LINC00052Q96N35 136 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 ATP6V1G2-DDX39BF2Z307 99 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 H7C1Q1 480 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 MPC2O95563 127 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 CXCL2P19875 107 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 CD80P33681 288 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 SCAND1P57086 179 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 TLE4Q04727 773 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 TGIF1Q15583 401 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 SF3B5Q9BWJ5 86 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 PRSS50Q9UI38 385 aa7.82□□□□□ -1.16
PDLIM5-222ENST00000615540 LRP5LA4QPB2 252 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 SIGLEC5O15389 551 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 ACTL6BO94805 426 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 SCAF4O95104 1147 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 IGHMP01871 453 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 CELA3AP09093 270 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 IFITM2Q01629 132 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 FAM58AQ8N1B3 248 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 C17orf78Q8N4C9 275 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 SOX7Q9BT81 388 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 PLXNB3Q9ULL4 1909 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 A0A0G2JK05 382 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 NPIPB9F8W1W9 429 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 H3F3CQ6NXT2 135 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 SKA3Q8IX90 412 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 OR14K1Q8NGZ2 314 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 GPR87Q9BY21 358 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 ERRFI1Q9UJM3 462 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF391Q9UJN7 358 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 IGHV3OR15-7A0A075B7D8 119 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 E5RGE8 158 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 K7ESF4 209 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 NKX6-1P78426 367 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 ZNF266Q14584 549 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 Q5BKY6 102 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 ARSJQ5FYB0 599 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 LCN15Q6UWW0 184 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 MDP1Q86V88 176 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 THNSL2Q86YJ6 484 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 ANGPTL6Q8NI99 470 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 HIPK2Q9H2X6 1198 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 NSG2Q9Y328 171 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 RPS10-NUDT3A0A1W2PQS6 291 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 NKX2-8O15522 239 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 SOX15O60248 233 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 BMP5P22003 454 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 RPS10P46783 165 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 PHYHD1Q5SRE7 291 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 JMJD6Q6NYC1 403 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 FAM181AQ8N9Y4 354 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 S100PBPQ96BU1 408 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 FBXO17Q96EF6 278 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 SCMH1Q96GD3 660 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 SERTAD4Q9NUC0 356 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 KCNK7Q9Y2U2 307 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 CHCHD2Q9Y6H1 151 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 PIGBOS1A0A0B4J2F0 54 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 CD1AP06126 327 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 SP1P08047 785 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 TBC1D26Q86UD7 250 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 ARRDC1Q8N5I2 433 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 RFESDQ8TAC1 157 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 ST7LQ8TDW4 575 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 MED30Q96HR3 178 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 WDR13Q9H1Z4 485 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 NAA60Q9H7X0 242 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 SPACA1Q9HBV2 294 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 PRMT8Q9NR22 394 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 GNG13Q9P2W3 67 aa7.81□□□□□ -1.16
PDLIM5-222ENST00000615540 HELZP42694 1942 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 UBE2L5PA0A1B0GUS4 154 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 RRP8O43159 456 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 TPPPO94811 219 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 GAS1P54826 345 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 RPS11P62280 158 aaKnown RBP eCLIP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 HBG1P69891 147 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 HBG2P69892 147 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 EIF3IQ13347 325 aaKnown RBP7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 C19orf48Q6RUI8 117 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 GFRALQ6UXV0 394 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 SLC35G3Q8N808 338 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 NECAP1Q8NC96 275 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 C14orf79Q96F83 325 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 TECTBQ96PL2 329 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 SLC39A9Q9NUM3 307 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 FAM96BQ9Y3D0 163 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 PMS2P1A4D2B8 440 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 FAM24AA6NFZ4 105 aa7.8□□□□□ -1.16
PDLIM5-222ENST00000615540 C17orf112F2Z3M2 114 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms