RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 MBD2Q9UBB5 411 aa16.5■□□□□ 0.23
MMP28-204ENST00000615136 ZNF175Q9Y473 711 aa16.5■□□□□ 0.23
MMP28-204ENST00000615136 SPTBN2O15020 2390 aa16.5■□□□□ 0.23
MMP28-204ENST00000615136 CSNK2A3Q8NEV1 391 aa16.5■□□□□ 0.23
MMP28-204ENST00000615136 OR5AP2Q8NGF4 316 aa16.5■□□□□ 0.23
MMP28-204ENST00000615136 PHYHIPLQ96FC7 376 aa16.5■□□□□ 0.23
MMP28-204ENST00000615136 POM121L2Q96KW2 1035 aa16.5■□□□□ 0.23
MMP28-204ENST00000615136 LINC00052Q96N35 136 aa16.5■□□□□ 0.23
MMP28-204ENST00000615136 TRIB1Q96RU8 372 aa16.5■□□□□ 0.23
MMP28-204ENST00000615136 RTBDNQ9BSG5 229 aaPredicted RBP16.5■□□□□ 0.23
MMP28-204ENST00000615136 ST6GALNAC5Q9BVH7 336 aa16.5■□□□□ 0.23
MMP28-204ENST00000615136 ATPIF1Q9UII2 106 aa16.5■□□□□ 0.23
MMP28-204ENST00000615136 DSPP15924 2871 aaKnown RBP16.49■□□□□ 0.23
MMP28-204ENST00000615136 TRBV6-7A0A0A0MS04 114 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 IGKV1-12A0A0C4DH73 117 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 EEF1E1-BLOC1S5C9J1V9 151 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 XRCC2O43543 280 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 IGKV1D-12P01611 117 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 OR3A2P47893 321 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 SUPT4H1P63272 117 aaKnown RBP16.49■□□□□ 0.23
MMP28-204ENST00000615136 CLEC18BQ6UXF7 455 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 MOB3CQ70IA8 216 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 P4HA3Q7Z4N8 544 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 BCL2L2Q92843 193 aaPredicted RBP16.49■□□□□ 0.23
MMP28-204ENST00000615136 PPA2Q9H2U2 334 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 CHMP1AQ9HD42 196 aaPredicted RBP16.49■□□□□ 0.23
MMP28-204ENST00000615136 RAB18Q9NP72 206 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 EHFQ9NZC4 300 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 ZNF391Q9UJN7 358 aa16.49■□□□□ 0.23
MMP28-204ENST00000615136 C5orf51A6NDU8 294 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 PSMB6P28072 239 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 LUMP51884 338 aaPredicted RBP16.48■□□□□ 0.23
MMP28-204ENST00000615136 CYCSP99999 105 aaKnown RBP16.48■□□□□ 0.23
MMP28-204ENST00000615136 ATXN7L3Q14CW9 347 aaPredicted RBP16.48■□□□□ 0.23
MMP28-204ENST00000615136 CNN3Q15417 329 aaKnown RBP16.48■□□□□ 0.23
MMP28-204ENST00000615136 SURF2Q15527 256 aaPredicted RBP16.48■□□□□ 0.23
MMP28-204ENST00000615136 BVESQ8NE79 360 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 BORCS8Q96FH0 119 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 CPNE2Q96FN4 548 aaPredicted RBP16.48■□□□□ 0.23
MMP28-204ENST00000615136 GMPPAQ96IJ6 420 aaPredicted RBP16.48■□□□□ 0.23
MMP28-204ENST00000615136 ZNF629Q9UEG4 869 aaPredicted RBP16.48■□□□□ 0.23
MMP28-204ENST00000615136 GPR160Q9UJ42 338 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 STARD10Q9Y365 291 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 FIGNL2A6NMB9 653 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 ZNF850A8MQ14 1090 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 KRBOX1C9JBD0 128 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 PROB1E7EW31 1015 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 SS18L1O75177 396 aaPredicted RBP16.48■□□□□ 0.23
MMP28-204ENST00000615136 RBP2P50120 134 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 PLCXD3Q63HM9 321 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 OR56B2PQ8NGI1 322 aa16.48■□□□□ 0.23
MMP28-204ENST00000615136 REPIN1Q9BWE0 567 aaKnown RBP16.48■□□□□ 0.23
MMP28-204ENST00000615136 FGF23Q9GZV9 251 aaPredicted RBP16.48■□□□□ 0.23
MMP28-204ENST00000615136 ZNF816-ZNF321PA0A0X1KG74 233 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 A0A1W2PR80 420 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 K7EM74 188 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 HTR3BO95264 441 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 COX5BP10606 129 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 RPS2P15880 293 aaKnown RBP16.47■□□□□ 0.23
MMP28-204ENST00000615136 SPINK2P20155 84 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 PRKACBP22694 351 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 GABRR1P24046 479 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 ARR3P36575 388 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 NUP62P37198 522 aaPredicted RBP16.47■□□□□ 0.23
MMP28-204ENST00000615136 C6orf201Q7Z4U5 140 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 MYPOPQ86VE0 399 aaPredicted RBP16.47■□□□□ 0.23
MMP28-204ENST00000615136 INO80EQ8NBZ0 244 aaPredicted RBP16.47■□□□□ 0.23
MMP28-204ENST00000615136 RELL2Q8NC24 303 aaPredicted RBP16.47■□□□□ 0.23
MMP28-204ENST00000615136 PXT1Q8NFP0 134 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 MAFIPQ8WZ33 124 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 METTL9Q9H1A3 318 aa16.47■□□□□ 0.23
MMP28-204ENST00000615136 A0A1B0GW55 424 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 SDCBPO00560 298 aaPredicted RBP16.46■□□□□ 0.23
MMP28-204ENST00000615136 RRP8O43159 456 aaKnown RBP16.46■□□□□ 0.23
MMP28-204ENST00000615136 KLK10O43240 276 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 DUX4L2P0CJ85 424 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 DUX4L3P0CJ86 424 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 DUX4L4P0CJ87 422 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 DUX4L5P0CJ88 424 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 DUX4L6P0CJ89 424 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 DUX4L7P0CJ90 424 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 WNT5AP41221 380 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 CHRFAM7AQ494W8 412 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 TFAP2EQ6VUC0 442 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 CALHM1Q8IU99 346 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 BATF2Q8N1L9 274 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 EMG1Q92979 244 aaKnown RBP16.46■□□□□ 0.23
MMP28-204ENST00000615136 ZNF75AQ96N20 296 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 ZNF471Q9BX82 626 aaPredicted RBP16.46■□□□□ 0.23
MMP28-204ENST00000615136 OR51B6Q9H340 312 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 DUX4Q9UBX2 424 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 DMXL2Q8TDJ6 3036 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 C13orf42A0A1B0GVH6 325 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 DLL1O00548 723 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 AQP7O14520 342 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 MSTNO14793 375 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 PI3P19957 117 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 SLC9A3R2Q15599 337 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 BEX5Q5H9J7 111 aa16.46■□□□□ 0.23
MMP28-204ENST00000615136 ASCL4Q6XD76 172 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms